RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 MT-CO2P00403 227 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 CFDP00746 253 aaPredicted RBP9.71□□□□□ -0.86
TPM1-209ENST00000558072 S100A7P31151 101 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 TPPP2P59282 170 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 RHOGP84095 191 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 CFHR3Q02985 330 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 AKR1C1Q04828 323 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 CD300CQ08708 224 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 VWC2Q2TAL6 325 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 LGALSLQ3ZCW2 172 aaPredicted RBP9.71□□□□□ -0.86
TPM1-209ENST00000558072 TMEM144Q7Z5S9 345 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 SLC51BQ86UW2 128 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 C9orf62Q8N4C0 152 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 ZNF709Q8N972 641 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 TMEM116Q8NCL8 245 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 OR4X1Q8NH49 305 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 GNPNAT1Q96EK6 184 aaPredicted RBP9.71□□□□□ -0.86
TPM1-209ENST00000558072 NOL4LQ96MY1 436 aaPredicted RBP9.71□□□□□ -0.86
TPM1-209ENST00000558072 FANCD2OSQ96PS1 177 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 SERTAD4Q9NUC0 356 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 FBXL17Q9UF56 701 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 SMCO3A2RU48 225 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 I3L2K1 104 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 OR2J3O76001 311 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 CXCL2P19875 107 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 PSMB8P28062 276 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 RAB9AP51151 201 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 SELENOTP62341 195 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 ACSM6Q6P461 480 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 SPSB3Q6PJ21 355 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 TEPPQ6URK8 271 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 S100A7AQ86SG5 101 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 KLHDC1Q8N7A1 406 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.7□□□□□ -0.86
TPM1-209ENST00000558072 RNF152Q8N8N0 203 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 UBAC2Q8NBM4 344 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 LINC01006Q8NI28 216 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 TMEM170AQ8WVE7 144 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 C21orf62Q9NYP8 219 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 LINC00527Q9UJ94 153 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 RNF114Q9Y508 228 aa9.7□□□□□ -0.86
TPM1-209ENST00000558072 PRSS46E5RG02 174 aa9.69□□□□□ -0.86
TPM1-209ENST00000558072 TPT1P13693 172 aaKnown RBP9.69□□□□□ -0.86
TPM1-209ENST00000558072 CLINT1Q14677 625 aa9.69□□□□□ -0.86
TPM1-209ENST00000558072 OPCMLQ14982 345 aa9.69□□□□□ -0.86
TPM1-209ENST00000558072 C15orf32Q32M92 178 aa9.69□□□□□ -0.86
TPM1-209ENST00000558072 OR5AU1Q8NGC0 362 aa9.69□□□□□ -0.86
TPM1-209ENST00000558072 SCARB1Q8WTV0 552 aa9.69□□□□□ -0.86
TPM1-209ENST00000558072 UBE2E2Q96LR5 201 aa9.69□□□□□ -0.86
TPM1-209ENST00000558072 ZNF471Q9BX82 626 aaPredicted RBP9.69□□□□□ -0.86
TPM1-209ENST00000558072 BOLA2-SMG1P6H3BVE0 249 aa9.68□□□□□ -0.86
TPM1-209ENST00000558072 K7EIM0 57 aa9.68□□□□□ -0.86
TPM1-209ENST00000558072 NUPL2O15504 423 aaKnown RBP9.68□□□□□ -0.86
TPM1-209ENST00000558072 GNG7O60262 68 aa9.68□□□□□ -0.86
TPM1-209ENST00000558072 CLN5O75503 358 aa9.68□□□□□ -0.86
TPM1-209ENST00000558072 MFAP2P55001 183 aa9.68□□□□□ -0.86
TPM1-209ENST00000558072 GAMTQ14353 236 aa9.68□□□□□ -0.86
TPM1-209ENST00000558072 STOML3Q8TAV4 291 aa9.68□□□□□ -0.86
TPM1-209ENST00000558072 BSCL2Q96G97 398 aaPredicted RBP9.68□□□□□ -0.86
TPM1-209ENST00000558072 MS4A10Q96PG2 267 aa9.68□□□□□ -0.86
TPM1-209ENST00000558072 SMIM3Q9BZL3 60 aa9.68□□□□□ -0.86
TPM1-209ENST00000558072 RNF24Q9Y225 148 aa9.68□□□□□ -0.86
TPM1-209ENST00000558072 WDR83OSQ9Y284 106 aa9.68□□□□□ -0.86
TPM1-209ENST00000558072 TIMM9Q9Y5J7 89 aa9.68□□□□□ -0.86
TPM1-209ENST00000558072 UBE2L5PA0A1B0GUS4 154 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 ZFP92A6NM28 416 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 NDUFB8O95169 186 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 MBP02144 154 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 CDX1P47902 265 aaPredicted RBP9.67□□□□□ -0.86
TPM1-209ENST00000558072 RND2P52198 227 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 SERF2P84101 59 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 RELQ04864 619 aaPredicted RBP9.67□□□□□ -0.86
TPM1-209ENST00000558072 ARL16Q0P5N6 197 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 KRTAP24-1Q3LI83 254 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 Q56UQ5 140 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 PXDC1Q5TGL8 231 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 ZNF329Q86UD4 541 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 HAPLN4Q86UW8 402 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 BAP18Q8IXM2 172 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 THAP8Q8NA92 274 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 NPIPB3Q92617 1050 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 PHYHIPLQ96FC7 376 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 ACY3Q96HD9 319 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 TRGV9Q99603 122 aa9.67□□□□□ -0.86
TPM1-209ENST00000558072 WDR61Q9GZS3 305 aaKnown RBP9.67□□□□□ -0.86
TPM1-209ENST00000558072 FNDC4Q9H6D8 234 aaPredicted RBP9.67□□□□□ -0.86
TPM1-209ENST00000558072 PRH1P02810 166 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 FGF7P21781 194 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 OR10J1P30954 320 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 NKX2-5P52952 324 aaPredicted RBP9.66□□□□□ -0.86
TPM1-209ENST00000558072 YPEL3P61236 119 aaPredicted RBP9.66□□□□□ -0.86
TPM1-209ENST00000558072 ZNF343Q6P1L6 599 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 C10orf99Q6UWK7 81 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 BTNL8Q6UX41 500 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 TREML4Q6UXN2 200 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 Q6ZRG5 221 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 C19orf35Q6ZS72 473 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 ZNF502Q8TBZ5 544 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 MYOZ3Q8TDC0 251 aa9.66□□□□□ -0.86
TPM1-209ENST00000558072 PSMG3Q9BT73 122 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms