RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 CD3GP09693 182 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 LIMS3P0CW19 117 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 LIMS4P0CW20 117 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 CRHBPP24387 322 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 FUSP35637 526 aaKnown RBP eCLIP3.22□□□□□ -1.89
SCFD1-223ENST00000557076 TMEM50BP56557 158 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 TAS2R43P59537 309 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 DAD1P61803 113 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 RPL30P62888 115 aaKnown RBP3.22□□□□□ -1.89
SCFD1-223ENST00000557076 QRFPP83859 136 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 CLINT1Q14677 625 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 YIF1BQ5BJH7 314 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 IGSF11Q5DX21 431 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 RBM48Q5RL73 367 aaKnown RBP3.22□□□□□ -1.89
SCFD1-223ENST00000557076 OGFRL1Q5TC84 451 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-223ENST00000557076 XAF1Q6GPH4 301 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 OR10K2Q6IF99 312 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 NKAIN3Q8N8D7 197 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 OR4S2Q8NH73 311 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 DCANP1Q8TF63 244 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 TMEM170AQ8WVE7 144 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 SMIM19Q96E16 107 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 GINS3Q9BRX5 216 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 UPK3BQ9BT76 320 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 CABLES2Q9BTV7 478 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 TMEM59Q9BXS4 323 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 GABARAPL3Q9BY60 117 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 NXF2Q9GZY0 626 aaKnown RBP3.22□□□□□ -1.89
SCFD1-223ENST00000557076 BET1LQ9NYM9 111 aa3.22□□□□□ -1.89
SCFD1-223ENST00000557076 MRPS7Q9Y2R9 242 aaKnown RBP3.22□□□□□ -1.89
SCFD1-223ENST00000557076 A0A0A6YYD4 124 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 A0A1W2PPK0 400 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 TCRBV3S1A0A5B6 114 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 FOXI3A8MTJ6 420 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-223ENST00000557076 TMEM14DPA8MWL7 114 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 USP17L23D6RBM5 183 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 EBAG9O00559 213 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 SOCS1O15524 211 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 HLA-DQB1P01920 261 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 ZNF688P0C7X2 276 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 TRAPPC2P0DI81 140 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 TRAPPC2BP0DI82 140 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 OR13C7P0DN81 318 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 NPPCP23582 126 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 MFAP4P55083 255 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 UNC119Q13432 240 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 RCN1Q15293 331 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 KCTD21Q4G0X4 260 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 Q56UQ5 140 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 C1orf100Q5SVJ3 147 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 THOC7Q6I9Y2 204 aaKnown RBP3.21□□□□□ -1.9
SCFD1-223ENST00000557076 ZNF773Q6PK81 442 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 TOMM20LQ6UXN7 152 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 TMPRSS11AQ6ZMR5 421 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 LRRTM1Q86UE6 522 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 H1FOOQ8IZA3 346 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-223ENST00000557076 UBAC2Q8NBM4 344 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 GGHQ92820 318 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 HSD17B10Q99714 261 aaKnown RBP3.21□□□□□ -1.9
SCFD1-223ENST00000557076 CIB1Q99828 191 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 CMSS1Q9BQ75 279 aaKnown RBP3.21□□□□□ -1.9
SCFD1-223ENST00000557076 URM1Q9BTM9 101 aaKnown RBP3.21□□□□□ -1.9
SCFD1-223ENST00000557076 COMMD5Q9GZQ3 224 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 GABARAPL1Q9H0R8 117 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 FNDC4Q9H6D8 234 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-223ENST00000557076 TMEM231Q9H6L2 316 aa3.21□□□□□ -1.9
SCFD1-223ENST00000557076 RBMX2Q9Y388 322 aaKnown RBP3.21□□□□□ -1.9
SCFD1-223ENST00000557076 YTHDF2Q9Y5A9 579 aaKnown RBP3.21□□□□□ -1.9
SCFD1-223ENST00000557076 F11RQ9Y624 299 aaKnown RBP3.21□□□□□ -1.9
SCFD1-223ENST00000557076 A0A087WTM6 91 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 IGHV3-21A0A0B4J1V1 117 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 ERICH4A6NGS2 130 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 LYRM9A8MSI8 78 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 F5H768 121 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 UPK2O00526 184 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 HBE1P02100 147 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 C1QBP02746 253 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 CD36P16671 472 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 GABRB1P18505 474 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 CRYBB3P26998 211 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 AP2S1P53680 142 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-223ENST00000557076 LINC00315P59091 139 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 WT1-ASQ06250 92 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 EIF4EBP1Q13541 118 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-223ENST00000557076 POU2AF1Q16633 256 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 KCTD9Q7L273 389 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 NFE4Q86UQ8 179 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 SPATA24Q86W54 205 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 STXBP6Q8NFX7 210 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 OR10W1Q8NGF6 305 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 OR52I1Q8NGK6 324 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 OR1L8Q8NGR8 309 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 RHOXF1Q8NHV9 184 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 CCDC124Q96CT7 223 aaKnown RBP3.2□□□□□ -1.9
SCFD1-223ENST00000557076 ARHGAP5-AS1Q96IT6 56 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 Q96MT0 163 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 DERL3Q96Q80 235 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 GINS4Q9BRT9 223 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 PECRQ9BY49 303 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 LPAR5Q9H1C0 372 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms