RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ZNF331Q9NQX6 463 aaPredicted RBP5□□□□□ -1.61
TDP1-215ENST00000556498 RNF181Q9P0P0 153 aa5□□□□□ -1.61
TDP1-215ENST00000556498 V9GY05 133 aa5□□□□□ -1.61
TDP1-215ENST00000556498 GBF1Q92538 1859 aa5□□□□□ -1.61
TDP1-215ENST00000556498 LY75O60449 1722 aa5□□□□□ -1.61
TDP1-215ENST00000556498 COL5A3P25940 1745 aaPredicted RBP5□□□□□ -1.61
TDP1-215ENST00000556498 EVPLQ92817 2033 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 SMIM26A0A096LP01 95 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 A8MWL6 223 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 OOSP1A8MZH6 123 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 SDCBPO00560 298 aaPredicted RBP4.99□□□□□ -1.61
TDP1-215ENST00000556498 HCRTO43612 131 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 BUB3O43684 328 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 LYZL6O75951 148 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 APCSP02743 223 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 RBP4P02753 201 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 CD3DP04234 171 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 FGF6P10767 208 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 DYNLT1P63172 113 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 TMEM187Q14656 261 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 C12orf74Q32Q52 190 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 BEAN1Q3B7T3 259 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 PHLDA2Q53GA4 152 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 LINC01545Q5VT33 79 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 DEFB132Q7Z7B7 95 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 LHFPL1Q86WI0 220 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 ZNF584Q8IVC4 421 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 CIARTQ8N365 385 aaPredicted RBP4.99□□□□□ -1.61
TDP1-215ENST00000556498 ZNF645Q8N7E2 425 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 ZNF114Q8NC26 417 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 KLHDC9Q8NEP7 349 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 ZNF563Q8TA94 476 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 RPS4Y2Q8TD47 263 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 FGF13Q92913 245 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 FGF11Q92914 225 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 ZNF501Q96CX3 271 aaPredicted RBP4.99□□□□□ -1.61
TDP1-215ENST00000556498 KXD1Q9BQD3 176 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 PLA2G2FQ9BZM2 168 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 IKZF5Q9H5V7 419 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 DKK2Q9UBU2 259 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 HES2Q9Y543 173 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 SCN7AQ01118 1682 aa4.99□□□□□ -1.61
TDP1-215ENST00000556498 ARID1BQ8NFD5 2236 aaPredicted RBP4.99□□□□□ -1.61
TDP1-215ENST00000556498 TRIP11Q15643 1979 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 RLFQ13129 1914 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 CITO14578 2027 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 A0A0J9YW62 118 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 FAM240AA0A1B0GVK7 77 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 A0A1W2PPK0 400 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 C5orf63A6NC05 138 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 LYRM9A8MSI8 78 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 PGLYRP1O75594 196 aaPredicted RBP4.98□□□□□ -1.61
TDP1-215ENST00000556498 HLA-DQA1P01909 254 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 SCGB1C2P0DMR2 95 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 LIFP15018 202 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 ZFP36P26651 326 aaKnown RBP4.98□□□□□ -1.61
TDP1-215ENST00000556498 S100A3P33764 101 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 PTGDSP41222 190 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 MRPS36P82909 103 aaKnown RBP4.98□□□□□ -1.61
TDP1-215ENST00000556498 LTBQ06643 244 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 FAM27E3Q08E93 113 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 ARFRP1Q13795 201 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 CFAP126Q5VTH2 177 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 NOXRED1Q6NXP6 359 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 C22orf39Q6P5X5 142 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 Q6ZRU5 148 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 Q6ZS49 121 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 C2orf91Q6ZV80 131 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 SBSPONQ8IVN8 264 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 MSRB3Q8IXL7 192 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 AMN1Q8IY45 258 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 TMEM99Q8N816 258 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 SSC4DQ8WTU2 575 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 TSKUQ8WUA8 353 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 DLX4Q92988 240 aaPredicted RBP4.98□□□□□ -1.61
TDP1-215ENST00000556498 FMC1Q96HJ9 113 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 CARD19Q96LW7 228 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 MGST2Q99735 147 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 TXNDC17Q9BRA2 123 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 PRRG4Q9BZD6 226 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 PARP12Q9H0J9 701 aaKnown RBP4.98□□□□□ -1.61
TDP1-215ENST00000556498 GNB4Q9HAV0 340 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 TNFRSF19Q9NS68 423 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 KCNE3Q9Y6H6 103 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 RGPD3A6NKT7 1758 aaPredicted RBP4.98□□□□□ -1.61
TDP1-215ENST00000556498 RGPD4Q7Z3J3 1758 aa4.98□□□□□ -1.61
TDP1-215ENST00000556498 TRBV19A0A075B6N1 114 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 TRAV18A0A075B6X5 111 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 TRAV4A0A0B4J268 109 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 IGHV1-24A0A0C4DH33 117 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 GRIFINA4D1Z8 144 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 C2orf70A6NJV1 201 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 A8MWV9 139 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 EPM2AB3EWF7 344 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 IGLL5B9A064 214 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 CD55P08174 381 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 FKBP2P26885 142 aaKnown RBP4.97□□□□□ -1.61
TDP1-215ENST00000556498 CSN1S1P47710 185 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 HBG1P69891 147 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 HBG2P69892 147 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms