RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 KRTAP25-1Q3LHN0 102 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 BRMS1LQ5PSV4 323 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 C1orf64Q8NEQ6 169 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 OR8J3Q8NGG0 315 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 FGF13Q92913 245 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 TSC22D3Q99576 134 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 SCRT1Q9BWW7 348 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 TMEM133Q9H2Q1 129 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 CKLFQ9UBR5 152 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 TRAPPC2LQ9UL33 140 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 MYH10P35580 1976 aa3.01□□□□□ -1.93
VRK1-203ENST00000555067 XIRP1Q702N8 1843 aaKnown RBP3□□□□□ -1.93
VRK1-203ENST00000555067 DOCK4Q8N1I0 1966 aa3□□□□□ -1.93
VRK1-203ENST00000555067 MYH7BA7E2Y1 1941 aa3□□□□□ -1.93
VRK1-203ENST00000555067 TRAV36DV7A0A075B6V5 113 aa3□□□□□ -1.93
VRK1-203ENST00000555067 IGKV1-9A0A0C4DH69 117 aa3□□□□□ -1.93
VRK1-203ENST00000555067 TRDV1A0A1B0GX56 115 aa3□□□□□ -1.93
VRK1-203ENST00000555067 A0A1W2PQD3 144 aa3□□□□□ -1.93
VRK1-203ENST00000555067 NDUFA2O43678 99 aa3□□□□□ -1.93
VRK1-203ENST00000555067 GADD45GO95257 159 aa3□□□□□ -1.93
VRK1-203ENST00000555067 CDS2O95674 445 aa3□□□□□ -1.93
VRK1-203ENST00000555067 TRGC2P03986 189 aa3□□□□□ -1.93
VRK1-203ENST00000555067 IGKV1-16P04430 117 aa3□□□□□ -1.93
VRK1-203ENST00000555067 NFYBP25208 207 aa3□□□□□ -1.93
VRK1-203ENST00000555067 CHCHD2P9Q5T1J5 151 aaPredicted RBP3□□□□□ -1.93
VRK1-203ENST00000555067 ZNF561Q8N587 486 aa3□□□□□ -1.93
VRK1-203ENST00000555067 RPP25LQ8N5L8 163 aaKnown RBP3□□□□□ -1.93
VRK1-203ENST00000555067 WFDC5Q8TCV5 224 aa3□□□□□ -1.93
VRK1-203ENST00000555067 IMMP2LQ96T52 175 aa3□□□□□ -1.93
VRK1-203ENST00000555067 RTL8AQ9BWD3 113 aa3□□□□□ -1.93
VRK1-203ENST00000555067 AICDAQ9GZX7 198 aa3□□□□□ -1.93
VRK1-203ENST00000555067 MED31Q9Y3C7 131 aa3□□□□□ -1.93
VRK1-203ENST00000555067 NUBP2Q9Y5Y2 271 aa3□□□□□ -1.93
VRK1-203ENST00000555067 CD109Q6YHK3 1445 aa3□□□□□ -1.93
VRK1-203ENST00000555067 VIRMAQ69YN4 1812 aaKnown RBP3□□□□□ -1.93
VRK1-203ENST00000555067 UBR2Q8IWV8 1755 aa3□□□□□ -1.93
VRK1-203ENST00000555067 NUP210LQ5VU65 1888 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 NYNRINQ9P2P1 1898 aaKnown RBP2.99□□□□□ -1.93
VRK1-203ENST00000555067 ADGBQ8N7X0 1667 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 TRAV40A0A0B4J280 105 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 A0A1B0GX51 115 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 IRGMA1A4Y4 181 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 EFCAB10A6NFE3 127 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 H3BT86 120 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 M0R378 163 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 S100A11P31949 105 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 CCR2P41597 374 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 EVX1P49640 407 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 RPS28P62857 69 aaKnown RBP2.99□□□□□ -1.93
VRK1-203ENST00000555067 SPINT4Q6UDR6 99 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 CROCCP2Q86T23 111 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 BORCS8Q96FH0 119 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 PFDN5Q99471 154 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 LAMTOR3Q9UHA4 124 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 BCL9O00512 1426 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 RFX7Q2KHR2 1363 aa2.99□□□□□ -1.93
VRK1-203ENST00000555067 TOPBP1Q92547 1522 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 TAF1LQ8IZX4 1826 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 IGKV2D-24A0A075B6R9 120 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 TLCD2A6NGC4 264 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 TMEM256-PLSCR3K7ERE1 68 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 OR2T1O43869 369 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 GZMBP10144 247 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 COL8A2P25067 703 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 FKBP2P26885 142 aaKnown RBP2.98□□□□□ -1.93
VRK1-203ENST00000555067 YPEL3P61236 119 aaPredicted RBP2.98□□□□□ -1.93
VRK1-203ENST00000555067 ZNF141Q15928 474 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 RTL8BQ17RB0 113 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 AGTRAPQ6RW13 159 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 MIR17HGQ75NE6 70 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 TRAPPC6BQ86SZ2 158 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 MSRB3Q8IXL7 192 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 LRRC18Q8N456 261 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 OR51T1Q8NGJ9 327 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 OR8D4Q8NGM9 314 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 ZC2HC1AQ96GY0 325 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 DUSP21Q9H596 190 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 NAT8Q9UHE5 227 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 LAMTOR2Q9Y2Q5 125 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 BICRAQ9NZM4 1560 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 WDR90Q96KV7 1748 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 SHANK3Q9BYB0 1731 aa2.98□□□□□ -1.93
VRK1-203ENST00000555067 CAMSAP2Q08AD1 1489 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 TRPM6Q9BX84 2022 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 CCDC88AQ3V6T2 1871 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 A0A0J9YW62 118 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 ODAMA1E959 279 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 TMEM189A5PLL7 270 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 TMEM212A6NML5 194 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 GABARAPH6UMI1 98 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 BPGMP07738 259 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 ZNF728P0DKX0 622 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 BCL2P10415 239 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 CD24P25063 80 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 RPL28P46779 137 aaKnown RBP2.97□□□□□ -1.93
VRK1-203ENST00000555067 FOXF1Q12946 379 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 BCL2L15Q5TBC7 163 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 PRR15Q8IV56 129 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 HIST3H2BBQ8N257 126 aa2.97□□□□□ -1.93
VRK1-203ENST00000555067 ISOC1Q96CN7 298 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms