RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 SCGB1D2O95969 90 aa17.92■□□□□ 0.46
TDP1-205ENST00000553527 NKX2-1P43699 371 aaPredicted RBP17.92■□□□□ 0.46
TDP1-205ENST00000553527 ZNF502Q8TBZ5 544 aa17.92■□□□□ 0.46
TDP1-205ENST00000553527 DNAH9Q9NYC9 4486 aa17.91■□□□□ 0.46
TDP1-205ENST00000553527 SUB1P53999 127 aaKnown RBP eCLIP17.91■□□□□ 0.46
TDP1-205ENST00000553527 FAM106AQ4KMX7 169 aa17.91■□□□□ 0.46
TDP1-205ENST00000553527 ADAMTSL5Q6ZMM2 481 aa17.91■□□□□ 0.46
TDP1-205ENST00000553527 GPHB5Q86YW7 130 aa17.91■□□□□ 0.46
TDP1-205ENST00000553527 DYNLRB2Q8TF09 96 aa17.91■□□□□ 0.46
TDP1-205ENST00000553527 MAGT1Q9H0U3 335 aa17.91■□□□□ 0.46
TDP1-205ENST00000553527 SIGLEC8Q9NYZ4 499 aa17.91■□□□□ 0.46
TDP1-205ENST00000553527 OR2T8A6NH00 312 aa17.9■□□□□ 0.46
TDP1-205ENST00000553527 C2orf70A6NJV1 201 aa17.9■□□□□ 0.46
TDP1-205ENST00000553527 WRBO00258 174 aa17.9■□□□□ 0.46
TDP1-205ENST00000553527 RNASE2P10153 161 aaKnown RBP17.9■□□□□ 0.46
TDP1-205ENST00000553527 HTR2BP41595 481 aa17.9■□□□□ 0.46
TDP1-205ENST00000553527 UBAC2Q8NBM4 344 aa17.9■□□□□ 0.46
TDP1-205ENST00000553527 SLC24A4Q8NFF2 622 aa17.9■□□□□ 0.46
TDP1-205ENST00000553527 VN1R17PQ8TDU5 208 aa17.9■□□□□ 0.46
TDP1-205ENST00000553527 C2orf50Q96LR7 162 aa17.9■□□□□ 0.46
TDP1-205ENST00000553527 SYNGR2O43760 224 aa17.89■□□□□ 0.45
TDP1-205ENST00000553527 IAPPP10997 89 aa17.89■□□□□ 0.45
TDP1-205ENST00000553527 FOLR2P14207 255 aa17.89■□□□□ 0.45
TDP1-205ENST00000553527 LCN12Q6JVE5 192 aa17.89■□□□□ 0.45
TDP1-205ENST00000553527 SCARB1Q8WTV0 552 aa17.89■□□□□ 0.45
TDP1-205ENST00000553527 CACNG8Q8WXS5 425 aa17.89■□□□□ 0.45
TDP1-205ENST00000553527 MISP3Q96FF7 219 aa17.89■□□□□ 0.45
TDP1-205ENST00000553527 LGALS9O00182 355 aa17.88■□□□□ 0.45
TDP1-205ENST00000553527 ID3Q02535 119 aa17.88■□□□□ 0.45
TDP1-205ENST00000553527 BSXQ3C1V8 233 aa17.88■□□□□ 0.45
TDP1-205ENST00000553527 CD300EQ496F6 205 aaPredicted RBP17.88■□□□□ 0.45
TDP1-205ENST00000553527 Q8N1Y9 231 aa17.88■□□□□ 0.45
TDP1-205ENST00000553527 CIB3Q96Q77 187 aaPredicted RBP17.88■□□□□ 0.45
TDP1-205ENST00000553527 C21orf62Q9NYP8 219 aa17.88■□□□□ 0.45
TDP1-205ENST00000553527 MGAT4CQ9UBM8 478 aa17.88■□□□□ 0.45
TDP1-205ENST00000553527 SSSCA1O60232 199 aa17.87■□□□□ 0.45
TDP1-205ENST00000553527 SIX6O95475 246 aa17.87■□□□□ 0.45
TDP1-205ENST00000553527 IFNA10P01566 189 aa17.87■□□□□ 0.45
TDP1-205ENST00000553527 FRMD6-AS1P0C7T7 363 aa17.87■□□□□ 0.45
TDP1-205ENST00000553527 NPY1RP25929 384 aa17.87■□□□□ 0.45
TDP1-205ENST00000553527 POLR2GP62487 172 aaKnown RBP eCLIP17.87■□□□□ 0.45
TDP1-205ENST00000553527 Q56UQ5 140 aa17.87■□□□□ 0.45
TDP1-205ENST00000553527 CORTO00230 105 aa17.86■□□□□ 0.45
TDP1-205ENST00000553527 TGOLN2O43493 480 aa17.86■□□□□ 0.45
TDP1-205ENST00000553527 IGHV3-48P01763 117 aa17.86■□□□□ 0.45
TDP1-205ENST00000553527 NHLRC4P0CG21 123 aaPredicted RBP17.86■□□□□ 0.45
TDP1-205ENST00000553527 CBLN1P23435 193 aa17.86■□□□□ 0.45
TDP1-205ENST00000553527 TM4SF20Q53R12 229 aa17.86■□□□□ 0.45
TDP1-205ENST00000553527 UNQ9165/PRO28630Q6UXU0 137 aa17.86■□□□□ 0.45
TDP1-205ENST00000553527 NOXA1Q86UR1 476 aa17.86■□□□□ 0.45
TDP1-205ENST00000553527 PINX1Q96BK5 328 aaKnown RBP17.86■□□□□ 0.45
TDP1-205ENST00000553527 MED28Q9H204 178 aa17.86■□□□□ 0.45
TDP1-205ENST00000553527 U3KQ87 197 aa17.86■□□□□ 0.45
TDP1-205ENST00000553527 K7EIM0 57 aa17.85■□□□□ 0.45
TDP1-205ENST00000553527 MBPP02686 304 aaPredicted RBP17.85■□□□□ 0.45
TDP1-205ENST00000553527 DEFB114Q30KQ6 69 aa17.85■□□□□ 0.45
TDP1-205ENST00000553527 C2orf83Q53S99 150 aa17.85■□□□□ 0.45
TDP1-205ENST00000553527 GTSCR1Q86UQ5 136 aa17.85■□□□□ 0.45
TDP1-205ENST00000553527 SBSPONQ8IVN8 264 aa17.85■□□□□ 0.45
TDP1-205ENST00000553527 TMEM213A2RRL7 107 aa17.84■□□□□ 0.45
TDP1-205ENST00000553527 IGHV4-30-4P0DP06 118 aa17.84■□□□□ 0.45
TDP1-205ENST00000553527 S100A10P60903 97 aa17.84■□□□□ 0.45
TDP1-205ENST00000553527 GUCA2BQ16661 112 aa17.84■□□□□ 0.45
TDP1-205ENST00000553527 RCL1Q9Y2P8 373 aaKnown RBP17.84■□□□□ 0.45
TDP1-205ENST00000553527 LSM5Q9Y4Y9 91 aaKnown RBP17.84■□□□□ 0.45
TDP1-205ENST00000553527 MT-CO2P00403 227 aa17.83■□□□□ 0.44
TDP1-205ENST00000553527 H2BFSP57053 126 aa17.83■□□□□ 0.44
TDP1-205ENST00000553527 RPP30P78346 268 aaKnown RBP17.83■□□□□ 0.44
TDP1-205ENST00000553527 PVRIGQ6DKI7 326 aa17.83■□□□□ 0.44
TDP1-205ENST00000553527 OR2K2Q8NGT1 345 aa17.83■□□□□ 0.44
TDP1-205ENST00000553527 BSCL2Q96G97 398 aaPredicted RBP17.83■□□□□ 0.44
TDP1-205ENST00000553527 CHRDL1Q9BU40 450 aa17.83■□□□□ 0.44
TDP1-205ENST00000553527 NMES1Q9C002 83 aa17.83■□□□□ 0.44
TDP1-205ENST00000553527 PAIP2BQ9ULR5 123 aaKnown RBP17.83■□□□□ 0.44
TDP1-205ENST00000553527 H3BP45 60 aa17.82■□□□□ 0.44
TDP1-205ENST00000553527 K7EPK0 472 aa17.82■□□□□ 0.44
TDP1-205ENST00000553527 OPRK1P41145 380 aa17.82■□□□□ 0.44
TDP1-205ENST00000553527 ATP5IP56385 69 aaPredicted RBP17.82■□□□□ 0.44
TDP1-205ENST00000553527 CYCSP99999 105 aaKnown RBP17.82■□□□□ 0.44
TDP1-205ENST00000553527 TMEM170AQ8WVE7 144 aa17.82■□□□□ 0.44
TDP1-205ENST00000553527 RAB40CQ96S21 281 aa17.82■□□□□ 0.44
TDP1-205ENST00000553527 TECRQ9NZ01 308 aaKnown RBP17.82■□□□□ 0.44
TDP1-205ENST00000553527 U3KQK5 164 aa17.82■□□□□ 0.44
TDP1-205ENST00000553527 IGHV3OR16-8A0A075B7F1 116 aa17.81■□□□□ 0.44
TDP1-205ENST00000553527 ZNF785A8K8V0 405 aa17.81■□□□□ 0.44
TDP1-205ENST00000553527 F8W735 103 aaPredicted RBP17.81■□□□□ 0.44
TDP1-205ENST00000553527 I3L2K1 104 aa17.81■□□□□ 0.44
TDP1-205ENST00000553527 L7N2F9 121 aa17.81■□□□□ 0.44
TDP1-205ENST00000553527 RAB11AP62491 216 aa17.81■□□□□ 0.44
TDP1-205ENST00000553527 VAMP2P63027 116 aa17.81■□□□□ 0.44
TDP1-205ENST00000553527 FCN2Q15485 313 aa17.81■□□□□ 0.44
TDP1-205ENST00000553527 SPANXN5Q5MJ07 72 aa17.81■□□□□ 0.44
TDP1-205ENST00000553527 SPSB3Q6PJ21 355 aa17.81■□□□□ 0.44
TDP1-205ENST00000553527 RNASEH2CQ8TDP1 164 aaKnown RBP17.81■□□□□ 0.44
TDP1-205ENST00000553527 WDR89Q96FK6 387 aaPredicted RBP17.81■□□□□ 0.44
TDP1-205ENST00000553527 C20orf24Q9BUV8 137 aa17.81■□□□□ 0.44
TDP1-205ENST00000553527 ZNF436Q9C0F3 470 aaPredicted RBP17.81■□□□□ 0.44
TDP1-205ENST00000553527 PSENENQ9NZ42 101 aa17.81■□□□□ 0.44
TDP1-205ENST00000553527 MLXQ9UH92 298 aa17.81■□□□□ 0.44
TDP1-205ENST00000553527 UFC1Q9Y3C8 167 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms