RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 OR10A3P58181 314 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 ZNF124Q15973 351 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 VMA21Q3ZAQ7 101 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 RPL39P5Q59GN2 51 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 PAPPA-AS1Q5QFB9 102 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 FAM122CQ6P4D5 195 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 GSG1LQ6UXU4 331 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 MMD2Q8IY49 270 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 OR51A4Q8NGJ6 313 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 OR10AC1Q8NH08 325 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 ZNRF2Q8NHG8 242 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 TNFAIP8L1Q8WVP5 186 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 GIMAP1Q8WWP7 306 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 DIRAS2Q96HU8 199 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 CCDC32Q9BV29 185 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 MAGT1Q9H0U3 335 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 DAZ1Q9NQZ3 744 aaKnown RBP3.65□□□□□ -1.83
CKAP4-203ENST00000553039 COMMD3Q9UBI1 195 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 ZNF257Q9Y2Q1 563 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 AK6Q9Y3D8 172 aaKnown RBP3.65□□□□□ -1.83
CKAP4-203ENST00000553039 ETV7Q9Y603 341 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 V9GY05 133 aa3.65□□□□□ -1.83
CKAP4-203ENST00000553039 TRAV8-7A0A075B6U6 113 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 FABP12A6NFH5 140 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 SMIM9A6NGZ8 99 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 FAM25AB3EWG3 89 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 FAM25CB3EWG5 89 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 FAM25GB3EWG6 89 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 DNASE2O00115 360 aaPredicted RBP3.64□□□□□ -1.83
CKAP4-203ENST00000553039 CHEK1O14757 476 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 GEMIN2O14893 280 aaKnown RBP3.64□□□□□ -1.83
CKAP4-203ENST00000553039 HPGDSO60760 199 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 UPK1BO75841 260 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 APOA1P02647 267 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 IGKV1-16P04430 117 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 RRASP10301 218 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 DEFA4P12838 97 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 PTBP1P26599 531 aaKnown RBP eCLIP3.64□□□□□ -1.83
CKAP4-203ENST00000553039 RBM11P57052 281 aaKnown RBP3.64□□□□□ -1.83
CKAP4-203ENST00000553039 DEFA1P59665 94 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 DEFA3P59666 94 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 NUTF2P61970 127 aaKnown RBP3.64□□□□□ -1.83
CKAP4-203ENST00000553039 ZNF415Q09FC8 603 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 IL18Q14116 193 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 OXA1LQ15070 435 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 USF2Q15853 346 aaPredicted RBP3.64□□□□□ -1.83
CKAP4-203ENST00000553039 TNXAQ16473 311 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 PRSS8Q16651 343 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 RGS21Q2M5E4 152 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 UBE2NLQ5JXB2 153 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 CNIH2Q6PI25 160 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 UNQ9165/PRO28630Q6UXU0 137 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 LRRTM1Q86UE6 522 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 CDH26Q8IXH8 852 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 GBGT1Q8N5D6 347 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 SAMD12Q8N8I0 201 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 DRAXINQ8NBI3 349 aaPredicted RBP3.64□□□□□ -1.83
CKAP4-203ENST00000553039 DUSP18Q8NEJ0 188 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 OR10K1Q8NGX5 313 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 MPLKIPQ8TAP9 179 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 LGALS14Q8TCE9 139 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 SRSF12Q8WXF0 261 aaKnown RBP3.64□□□□□ -1.83
CKAP4-203ENST00000553039 OR2A7Q96R45 310 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 SCRT1Q9BWW7 348 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 C1QTNF4Q9BXJ3 329 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 MIXL1Q9H2W2 232 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 IFI27L2Q9H2X8 130 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 TAS2R4Q9NYW5 299 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 THYN1Q9P016 225 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 SPATA2Q9UM82 520 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 V9GYH0 126 aa3.64□□□□□ -1.83
CKAP4-203ENST00000553039 DBX1A6NMT0 343 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 SLC17A2O00624 439 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 CYB5BO43169 146 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 IGHV3-23P01764 117 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 HTN3P15516 51 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 IGFBP3P17936 291 aaPredicted RBP3.63□□□□□ -1.83
CKAP4-203ENST00000553039 ELK1P19419 428 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 RAB3AP20336 220 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 ZBTB25P24278 435 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 CEACAM6P40199 344 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 NKX2-1P43699 371 aaPredicted RBP3.63□□□□□ -1.83
CKAP4-203ENST00000553039 TFPI2P48307 235 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 INPP1P49441 399 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 SSBP2P81877 361 aaPredicted RBP3.63□□□□□ -1.83
CKAP4-203ENST00000553039 GNMTQ14749 295 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 RAB11BQ15907 218 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 ZNF79Q15937 498 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 PYDC2Q56P42 97 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 HES5Q5TA89 166 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 TRIQKQ629K1 86 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 GAPTQ8N292 157 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 JAGN1Q8N5M9 183 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 GDPD1Q8N9F7 314 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 ZNF383Q8NA42 475 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 NEXN-AS1Q8NBZ9 246 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 OR51A2Q8NGJ7 313 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 OR6M1Q8NGM8 313 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 C15orf40Q8WUR7 153 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms