RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 PRDM13Q9H4Q3 707 aa7.78□□□□□ -1.16
TMEM116-216ENST00000552800 HILPDAQ9Y5L2 63 aa7.78□□□□□ -1.16
TMEM116-216ENST00000552800 ASH1LQ9NR48 2969 aaKnown RBP7.78□□□□□ -1.16
TMEM116-216ENST00000552800 PTPN13Q12923 2485 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 FBN2P35556 2912 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 IGKV1D-37A0A075B6S9 117 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 SRP19P09132 144 aaKnown RBP7.77□□□□□ -1.17
TMEM116-216ENST00000552800 EGR2P11161 476 aaPredicted RBP7.77□□□□□ -1.17
TMEM116-216ENST00000552800 MFAP2P55001 183 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 CX3CL1P78423 397 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 MMDQ15546 238 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 TNXAQ16473 311 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 FFAR4Q5NUL3 377 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 SLC35E3Q7Z769 313 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 SVBPQ8N300 66 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 OR4X1Q8NH49 305 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 GATAD1Q8WUU5 269 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 C17orf50Q8WW18 174 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 TMEM190Q8WZ59 177 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 RAB24Q969Q5 203 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 RBM14Q96PK6 669 aaKnown RBP7.77□□□□□ -1.17
TMEM116-216ENST00000552800 RNF2Q99496 336 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 DMRT1Q9Y5R6 373 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 PXMP4Q9Y6I8 212 aa7.77□□□□□ -1.17
TMEM116-216ENST00000552800 NAV3Q8IVL0 2385 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 IGLV11-55A0A075B6I3 123 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 IGHV7-81A0A0B4J1V7 117 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 LOC102723971A0A1B0GUV8 181 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 TCRBV4S1A1TA0A5B7 111 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 SMCO3A2RU48 225 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 TMEM250H0YL14 139 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 OR5G3P0C626 314 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 KRTAP10-9P60411 292 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 B2MP61769 119 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 ICAM4Q14773 271 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 FXYD3Q14802 87 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 MLANAQ16655 118 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 AKIRIN2Q53H80 203 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 C19orf54Q5BKX5 351 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 C10orf55Q5SWW7 151 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 ASPHD1Q5U4P2 390 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 SSX7Q7RTT5 188 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 SLC16A13Q7RTY0 426 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 C16orf82Q7Z2V1 217 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 SGMS2Q8NHU3 365 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 PERPQ96FX8 193 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 HINT2Q9BX68 163 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 KRTAP4-9Q9BYQ8 210 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 VAX2Q9UIW0 290 aa7.76□□□□□ -1.17
TMEM116-216ENST00000552800 CRYBG3Q68DQ2 2970 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 ABCA1O95477 2261 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 MAP1LC3B2A6NCE7 125 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 OPN1MWP04001 364 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 OPN1MW2P0DN77 364 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 OPN1MW3P0DN78 364 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 BCL2P10415 239 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 AREGP15514 252 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 TMEM11P17152 192 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 CDC34P49427 236 aaPredicted RBP7.75□□□□□ -1.17
TMEM116-216ENST00000552800 RHOBP62745 196 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 PRB3Q04118 309 aaPredicted RBP7.75□□□□□ -1.17
TMEM116-216ENST00000552800 FBLN7Q53RD9 439 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 KLF17Q5JT82 389 aaPredicted RBP7.75□□□□□ -1.17
TMEM116-216ENST00000552800 MIC13Q5XKP0 118 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 CYP2G1PQ6ZSU1 146 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 STPG3Q8N7X2 389 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 NANPQ8TBE9 248 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 TXN2Q99757 166 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 MRPL32Q9BYC8 188 aaKnown RBP7.75□□□□□ -1.17
TMEM116-216ENST00000552800 MAP1LC3BQ9GZQ8 125 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 TUBA4BQ9H853 241 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 MANBALQ9NQG1 85 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 HIF1ANQ9NWT6 349 aa7.75□□□□□ -1.17
TMEM116-216ENST00000552800 UTP20O75691 2785 aaKnown RBP7.75□□□□□ -1.17
TMEM116-216ENST00000552800 TRAV30A0A087WSZ9 112 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 TRBV9A0A0B4J1U6 114 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 F8W036 122 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 K7EIM0 57 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 M0QZK8 103 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 CLN5O75503 358 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 SNAPINO95295 136 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 CXorf1O96002 111 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 IFNA1P01562 189 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 IGF1P05019 195 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 SFTA3P0C7M3 94 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 HIST1H1BP16401 226 aaKnown RBP7.74□□□□□ -1.17
TMEM116-216ENST00000552800 FAM74A3Q4VXF1 159 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 PQLC2Q6ZP29 291 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 C5orf56Q8N8D9 126 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 OR2T6Q8NHC8 308 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 NRGNQ92686 78 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 RARRES2Q99969 163 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 SLC25A33Q9BSK2 321 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 DNAJC4Q9NNZ3 241 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 TREM1Q9NP99 234 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 FAM96BQ9Y3D0 163 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 VPS13CQ709C8 3753 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 CELSR2Q9HCU4 2923 aa7.74□□□□□ -1.17
TMEM116-216ENST00000552800 CR1P17927 2039 aa7.73□□□□□ -1.17
TMEM116-216ENST00000552800 A0A1W2PPV4 95 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms