RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 MAS1LP35410 378 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 AKR1C2P52895 323 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 RAB25P57735 213 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 BLCAPP62952 87 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 PLGLAQ15195 96 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 PRSS8Q16651 343 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 TATDN3Q17R31 274 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 AARDQ4LEZ3 155 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 NMSQ5H8A3 153 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 ZNF562Q6V9R5 426 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 H2BFWTQ7Z2G1 175 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 MMD2Q8IY49 270 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 CASTOR1Q8WTX7 329 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 RRNAD1Q96FB5 475 aaKnown RBP4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 SEC22CQ9BRL7 303 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 FBXL15Q9H469 300 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 TMEM14BQ9NUH8 114 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 COA4Q9NYJ1 87 aa4.97□□□□□ -1.61
DEPDC4-210ENST00000551642 IGHV7-81A0A0B4J1V7 117 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 A0A0G2JRQ6 117 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 A0A1B0GU03 582 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 FCN1O00602 326 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 SNAPC5O75971 98 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 CA2P00918 260 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 OR9G9P0C7N8 305 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 HLA-GP17693 338 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 CRIP2P52943 208 aaPredicted RBP4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 RPL8P62917 257 aaKnown RBP4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 CX3CL1P78423 397 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 PJVKQ0ZLH3 352 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 SSX9Q7RTT3 188 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 LYZL2Q7Z4W2 148 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 ZNF429Q86V71 674 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 FOXRED2Q8IWF2 684 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 C12orf45Q8N5I9 185 aaPredicted RBP4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 RNASE11Q8TAA1 199 aaKnown RBP4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 ZNF430Q9H8G1 570 aaPredicted RBP4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 ZNF702PQ9H963 129 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 FKBP11Q9NYL4 201 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 CACFD1Q9UGQ2 172 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 PRNDQ9UKY0 176 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 FOXA2Q9Y261 457 aaPredicted RBP4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 ZNF257Q9Y2Q1 563 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 ALG5Q9Y673 324 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 SORL1Q92673 2214 aa4.96□□□□□ -1.62
DEPDC4-210ENST00000551642 DNAH5Q8TE73 4624 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 TRAV3A0A0B4J244 114 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 C15orf61A6NNL5 157 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 PITX3O75364 302 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 ADAP1O75689 374 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 ACTL6BO94805 426 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 IFNA21P01568 189 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 IGF1P05019 195 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 HOXB5P09067 269 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 SULT1A3P0DMM9 295 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 SULT1A4P0DMN0 295 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 SMCO1Q147U7 214 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 FXYD3Q14802 87 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 AKIRIN2Q53H80 203 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 GGNBP1Q5YKI7 109 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 THOC7Q6I9Y2 204 aaKnown RBP4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 Q6ZTC4 211 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 SLC35E3Q7Z769 313 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 OR5B3Q8NH48 314 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 OR52E5Q8NH55 327 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 OR4A16Q8NH70 328 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 OR2T6Q8NHC8 308 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 ARPC1AQ92747 370 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 GPR146Q96CH1 333 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 SPIN2AQ99865 258 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 SPIN2BQ9BPZ2 258 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 HSPB9Q9BQS6 159 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 SRSF8Q9BRL6 282 aaKnown RBP4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 COMMD5Q9GZQ3 224 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 OR51J1Q9H342 316 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 NDUFA4L2Q9NRX3 87 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 RNF213Q63HN8 5207 aa4.95□□□□□ -1.62
DEPDC4-210ENST00000551642 TEX50A0A1B0GTY4 177 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 SH2D7A6NKC9 451 aaPredicted RBP4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 MPTX1A8MV57 137 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 FAM90A26D6RGX4 464 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 E7EUB6 86 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 INS-IGF2F8WCM5 200 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 ATP6V0E1O15342 81 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 ST8SIA3O43173 380 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 CNIH1O95406 144 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 RPL27AP46776 148 aaKnown RBP4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 OR2B8PP59922 312 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 SPCS3P61009 180 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 HSPE1P61604 102 aaKnown RBP4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 GNB1P62873 340 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 NDPQ00604 133 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 TMEM267Q0VDI3 215 aaPredicted RBP4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 TNXAQ16473 311 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 IZUMO4Q1ZYL8 232 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 C9orf152Q5JTZ5 239 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 HSD17B13Q7Z5P4 300 aaPredicted RBP4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 UXS1Q8NBZ7 420 aa4.94□□□□□ -1.62
DEPDC4-210ENST00000551642 OR5M8Q8NGP6 311 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms