RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CCL19Q99731 98 aa9.15□□□□□ -0.94
RAB5C-208ENST00000551338 SSX3Q99909 188 aa9.15□□□□□ -0.94
RAB5C-208ENST00000551338 SPOCK3Q9BQ16 436 aa9.15□□□□□ -0.94
RAB5C-208ENST00000551338 C19orf24Q9BVV8 132 aa9.15□□□□□ -0.94
RAB5C-208ENST00000551338 MLXQ9UH92 298 aa9.15□□□□□ -0.94
RAB5C-208ENST00000551338 POLR3KQ9Y2Y1 108 aaPredicted RBP9.15□□□□□ -0.94
RAB5C-208ENST00000551338 ARL2-SNX15V9GYD0 113 aa9.15□□□□□ -0.94
RAB5C-208ENST00000551338 PKD1L2Q7Z442 2459 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 IGHV3-21A0A0B4J1V1 117 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 SCO2A0A1W2PP80 73 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 CLN5O75503 358 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 CXCL1P09341 107 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 C8orf88P0DMB2 117 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 RAB5AP20339 215 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 UBE2E1P51965 193 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 SELENOTP62341 195 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 HES1Q14469 280 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 ELOBQ15370 118 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 ADIRFQ15847 76 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 MORN5Q5VZ52 161 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 PATE2Q6UY27 113 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 C16orf82Q7Z2V1 217 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 OR51G1Q8NGK1 321 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 C10orf105Q8TEF2 133 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 Q8WTZ3 238 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 C11orf52Q96A22 123 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 MALSU1Q96EH3 234 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 FAM167A-AS1Q96KT0 104 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 PIMREGQ9BSJ6 248 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 SLC25A2Q9BXI2 301 aa9.14□□□□□ -0.95
RAB5C-208ENST00000551338 HRNRQ86YZ3 2850 aaPredicted RBP9.13□□□□□ -0.95
RAB5C-208ENST00000551338 CHD8Q9HCK8 2581 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 IGHV4-61A0A0C4DH41 118 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 CXorf65A6NEN9 183 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 I3L2K1 104 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 CTRB1P17538 263 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 TAS2R45P59539 299 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 BPIFB3P59826 476 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 NDPQ00604 133 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 FXYD3Q14802 87 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 CTRB2Q6GPI1 263 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 PQLC2Q6ZP29 291 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 ZFP82Q8N141 532 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 TMEM116Q8NCL8 245 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 OR1L4Q8NGR5 311 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 OR4X1Q8NH49 305 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 FAM168AQ92567 244 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 PFDN5Q99471 154 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 DERL1Q9BUN8 251 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 CTDSP1Q9GZU7 261 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 TMEM167BQ9NRX6 74 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 TNFRSF19Q9NS68 423 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 DOK5Q9P104 306 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 WNK2Q9Y3S1 2297 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 PIEZO1Q92508 2521 aa9.13□□□□□ -0.95
RAB5C-208ENST00000551338 TRAV5A0A0B4J249 113 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 C1orf196B1AJZ1 125 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 CLDN34H7C241 214 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 COX7A2P2O60397 106 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 OR7C2O60412 319 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 NDUFB4O95168 129 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 CNIH1O95406 144 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 TMEM11P17152 192 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 SAA4P35542 130 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 RAB5BP61020 215 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 ASPHD1Q5U4P2 390 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 C10orf113Q5VZT2 155 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 ZNF843Q8N446 348 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 C22orf15Q8WYQ4 148 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 FAM103A1Q9BTL3 118 aaKnown RBP9.12□□□□□ -0.95
RAB5C-208ENST00000551338 WNT10AQ9GZT5 417 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 LPAR2Q9HBW0 351 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 DNAJC4Q9NNZ3 241 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 ZNF355PQ9NSJ1 428 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 TMEM242Q9NWH2 141 aa9.12□□□□□ -0.95
RAB5C-208ENST00000551338 TRBV20OR9-2A0A075B6H5 130 aa9.11□□□□□ -0.95
RAB5C-208ENST00000551338 TGIF2-C20orf24A0A0A6YYL0 155 aa9.11□□□□□ -0.95
RAB5C-208ENST00000551338 K7EIM0 57 aa9.11□□□□□ -0.95
RAB5C-208ENST00000551338 NDUFS8O00217 210 aa9.11□□□□□ -0.95
RAB5C-208ENST00000551338 IGLC1P0CG04 106 aa9.11□□□□□ -0.95
RAB5C-208ENST00000551338 PAX8Q06710 450 aa9.11□□□□□ -0.95
RAB5C-208ENST00000551338 SRSF1Q07955 248 aaKnown RBP eCLIP9.11□□□□□ -0.95
RAB5C-208ENST00000551338 FAM120AOSQ5T036 256 aa9.11□□□□□ -0.95
RAB5C-208ENST00000551338 LINC01551Q86U37 167 aa9.11□□□□□ -0.95
RAB5C-208ENST00000551338 OR5AU1Q8NGC0 362 aa9.11□□□□□ -0.95
RAB5C-208ENST00000551338 C2CD4CQ8TF44 421 aa9.11□□□□□ -0.95
RAB5C-208ENST00000551338 GSX1Q9H4S2 264 aaPredicted RBP9.11□□□□□ -0.95
RAB5C-208ENST00000551338 URGCP-MRPS24S4R325 110 aa9.11□□□□□ -0.95
RAB5C-208ENST00000551338 NPFFO15130 113 aa9.1□□□□□ -0.95
RAB5C-208ENST00000551338 TSPAN9O75954 239 aa9.1□□□□□ -0.95
RAB5C-208ENST00000551338 OR10J4P0C629 311 aa9.1□□□□□ -0.95
RAB5C-208ENST00000551338 ATP5J2P56134 94 aa9.1□□□□□ -0.95
RAB5C-208ENST00000551338 PLP1P60201 277 aa9.1□□□□□ -0.95
RAB5C-208ENST00000551338 UBE2L3P68036 154 aaKnown RBP9.1□□□□□ -0.95
RAB5C-208ENST00000551338 CX3CL1P78423 397 aa9.1□□□□□ -0.95
RAB5C-208ENST00000551338 Q8N9W7 124 aa9.1□□□□□ -0.95
RAB5C-208ENST00000551338 ARPC1AQ92747 370 aa9.1□□□□□ -0.95
RAB5C-208ENST00000551338 UHRF2Q96PU4 802 aa9.1□□□□□ -0.95
RAB5C-208ENST00000551338 PRELID1Q9Y255 219 aa9.1□□□□□ -0.95
RAB5C-208ENST00000551338 IGLV11-55A0A075B6I3 123 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms