RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 DEFB131BA0A096LNP1 70 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 IGHV3-66A0A0C4DH42 116 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 MEIS3P1A6NDR6 274 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 PMP2P02689 132 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 C4BPBP20851 252 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 CRYBB3P26998 211 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 PSMB9P28065 219 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 TAS2R46P59540 309 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 MXD1Q05195 221 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 KCTD21Q4G0X4 260 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 OR5H2Q8NGV7 314 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 DCANP1Q8TF63 244 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 PINX1Q96BK5 328 aaKnown RBP7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 VCX3BQ9H321 246 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 RABAC1Q9UI14 185 aa7.09□□□□□ -1.27
TRAFD1-207ENST00000550051 DNAH17Q9UFH2 4485 aa7.09□□□□□ -1.28
TRAFD1-207ENST00000550051 ANKRD65E5RJM6 399 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 CORTO00230 105 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 IGKV1-39P01597 117 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 IGKV1D-39P04432 117 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 NPY1RP25929 384 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 S100GP29377 79 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 SNCAP37840 140 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 UCP3P55916 312 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 METTL26Q96S19 204 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 RAB40CQ96S21 281 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 NDUFAF3Q9BU61 184 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 YTHDF1Q9BYJ9 559 aaKnown RBP7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 FXYD6Q9H0Q3 95 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 RNF167Q9H6Y7 350 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 RAB26Q9ULW5 256 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 U3KQE9 123 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 RYR1P21817 5038 aa7.08□□□□□ -1.28
TRAFD1-207ENST00000550051 PKD1P98161 4303 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 KNCNA6PVL3 124 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 CLN5O75503 358 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 ZNF688P0C7X2 276 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 RPL5P46777 297 aaKnown RBP7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 P2RY1P47900 373 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 AP2S1P53680 142 aaPredicted RBP7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 SUB1P53999 127 aaKnown RBP eCLIP7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 PHLDA2Q53GA4 152 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 ACTL10Q5JWF8 245 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 IZUMO2Q6UXV1 221 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 TBC1D26Q86UD7 250 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 CROCCP3Q8IVE0 287 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 STXBP6Q8NFX7 210 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 OR4X1Q8NH49 305 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 ANAPC16Q96DE5 110 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 FAM210BQ96KR6 192 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 C1QTNF4Q9BXJ3 329 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 SEPSECSQ9HD40 501 aaKnown RBP7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 CELA1Q9UNI1 258 aa7.07□□□□□ -1.28
TRAFD1-207ENST00000550051 A0A0B4J293 547 aa7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 M0R2N4 97 aa7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 CD74P04233 296 aa7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 RNASE2P10153 161 aaKnown RBP7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 PRSS3P35030 304 aa7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 HRH1P35367 487 aa7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 EIF2B2P49770 351 aaKnown RBP7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 NUTF2P61970 127 aaKnown RBP7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 Q6ZR54 194 aa7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 TMEM230Q96A57 120 aa7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 MRGPRFQ96AM1 343 aa7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 NARS2Q96I59 477 aaKnown RBP7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 NEU1Q99519 415 aa7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 KRTAP4-5Q9BYR2 181 aa7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 CLEC5AQ9NY25 188 aa7.06□□□□□ -1.28
TRAFD1-207ENST00000550051 TRAV30A0A087WSZ9 112 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 LOC100506127A0A0U1RQW1 187 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 HELTA6NFD8 242 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 SMIM9A6NGZ8 99 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 IGKV1-17P01599 117 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 P0C879 139 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 HLA-DMAP28067 261 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 PPP5CP53041 499 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 TAS2R20P59543 309 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 TSPAN5P62079 268 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 MLANAQ16655 118 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 IZUMO4Q1ZYL8 232 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 UBE2NLQ5JXB2 153 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 TMEM69Q5SWH9 247 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 C16orf54Q6UWD8 224 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 GPX8Q8TED1 209 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 SCRT1Q9BWW7 348 aa7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 FNDC4Q9H6D8 234 aaPredicted RBP7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 MRPL36Q9P0J6 103 aaKnown RBP7.05□□□□□ -1.28
TRAFD1-207ENST00000550051 TMEM189A5PLL7 270 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 H3BMM0 161 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 SCGB2A1O75556 95 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 IFNA10P01566 189 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 IFNA21P01568 189 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 IFNA17P01571 189 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 IGKV1-5P01602 117 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 SPART-AS1P0CW21 52 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 ETV6P41212 452 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 RND3P61587 244 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 DHRS2Q13268 280 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 BSXQ3C1V8 233 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 RNF212Q495C1 297 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms