RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 SMCO3A2RU48 225 aa22.43■■□□□ 1.18
BRF1-213ENST00000548421 FAM223BA6NKX1 122 aa22.43■■□□□ 1.18
BRF1-213ENST00000548421 PSMB8P28062 276 aa22.43■■□□□ 1.18
BRF1-213ENST00000548421 TPPP2P59282 170 aa22.43■■□□□ 1.18
BRF1-213ENST00000548421 DEFA5Q01523 94 aa22.43■■□□□ 1.18
BRF1-213ENST00000548421 ZNF266Q14584 549 aa22.43■■□□□ 1.18
BRF1-213ENST00000548421 C10orf99Q6UWK7 81 aa22.43■■□□□ 1.18
BRF1-213ENST00000548421 FAM223AQ8IWN6 122 aa22.43■■□□□ 1.18
BRF1-213ENST00000548421 FOXE3Q13461 319 aa22.42■■□□□ 1.18
BRF1-213ENST00000548421 GAMTQ14353 236 aa22.42■■□□□ 1.18
BRF1-213ENST00000548421 C15orf32Q32M92 178 aa22.42■■□□□ 1.18
BRF1-213ENST00000548421 SCARB1Q8WTV0 552 aa22.42■■□□□ 1.18
BRF1-213ENST00000548421 CYTL1Q9NRR1 136 aa22.42■■□□□ 1.18
BRF1-213ENST00000548421 UBE2L5PA0A1B0GUS4 154 aa22.41■■□□□ 1.18
BRF1-213ENST00000548421 IGHV3-48P01763 117 aa22.41■■□□□ 1.18
BRF1-213ENST00000548421 ELANEP08246 267 aa22.41■■□□□ 1.18
BRF1-213ENST00000548421 VN1R17PQ8TDU5 208 aa22.41■■□□□ 1.18
BRF1-213ENST00000548421 KLK15Q9H2R5 256 aa22.41■■□□□ 1.18
BRF1-213ENST00000548421 NPVFQ9HCQ7 196 aa22.41■■□□□ 1.18
BRF1-213ENST00000548421 MFSD2BA6NFX1 497 aa22.41■■□□□ 1.18
BRF1-213ENST00000548421 RAB9AP51151 201 aa22.41■■□□□ 1.18
BRF1-213ENST00000548421 AKR1C1Q04828 323 aa22.41■■□□□ 1.18
BRF1-213ENST00000548421 RPL7L1Q6DKI1 246 aaKnown RBP22.41■■□□□ 1.18
BRF1-213ENST00000548421 COMMD1Q8N668 190 aa22.41■■□□□ 1.18
BRF1-213ENST00000548421 KLHDC1Q8N7A1 406 aa22.41■■□□□ 1.18
BRF1-213ENST00000548421 CXorf58Q96LI9 332 aa22.41■■□□□ 1.18
BRF1-213ENST00000548421 ZNF471Q9BX82 626 aaPredicted RBP22.41■■□□□ 1.18
BRF1-213ENST00000548421 BORCS7-ASMTA0A0B4J1R7 106 aa22.4■■□□□ 1.18
BRF1-213ENST00000548421 JTBO76095 146 aa22.4■■□□□ 1.18
BRF1-213ENST00000548421 IFNA5P01569 189 aa22.4■■□□□ 1.18
BRF1-213ENST00000548421 ACY3Q96HD9 319 aa22.4■■□□□ 1.18
BRF1-213ENST00000548421 USMG5Q96IX5 58 aa22.4■■□□□ 1.18
BRF1-213ENST00000548421 ATP5G2Q06055 141 aa22.39■■□□□ 1.17
BRF1-213ENST00000548421 ACSM6Q6P461 480 aa22.39■■□□□ 1.17
BRF1-213ENST00000548421 TREML4Q6UXN2 200 aa22.39■■□□□ 1.17
BRF1-213ENST00000548421 RNF152Q8N8N0 203 aa22.39■■□□□ 1.17
BRF1-213ENST00000548421 TMEM116Q8NCL8 245 aa22.39■■□□□ 1.17
BRF1-213ENST00000548421 C21orf62Q9NYP8 219 aa22.39■■□□□ 1.17
BRF1-213ENST00000548421 MRPL36Q9P0J6 103 aaKnown RBP22.39■■□□□ 1.17
BRF1-213ENST00000548421 RND2P52198 227 aa22.38■■□□□ 1.17
BRF1-213ENST00000548421 LCNL1Q6ZST4 164 aa22.38■■□□□ 1.17
BRF1-213ENST00000548421 TMEM144Q7Z5S9 345 aa22.38■■□□□ 1.17
BRF1-213ENST00000548421 UBAC2Q8NBM4 344 aa22.38■■□□□ 1.17
BRF1-213ENST00000548421 OR5AU1Q8NGC0 362 aa22.38■■□□□ 1.17
BRF1-213ENST00000548421 OR4X1Q8NH49 305 aa22.38■■□□□ 1.17
BRF1-213ENST00000548421 SETD2Q9BYW2 2564 aaPredicted RBP22.38■■□□□ 1.17
BRF1-213ENST00000548421 A0A0G2JLM5 398 aa22.37■■□□□ 1.17
BRF1-213ENST00000548421 CLPSL1A2RUU4 121 aa22.37■■□□□ 1.17
BRF1-213ENST00000548421 SLC51BQ86UW2 128 aa22.37■■□□□ 1.17
BRF1-213ENST00000548421 WIPF2Q8TF74 440 aaPredicted RBP22.37■■□□□ 1.17
BRF1-213ENST00000548421 NPIPB3Q92617 1050 aa22.37■■□□□ 1.17
BRF1-213ENST00000548421 EEF1AKMT3Q96AZ1 226 aa22.37■■□□□ 1.17
BRF1-213ENST00000548421 PARD6GQ9BYG4 376 aaPredicted RBP22.37■■□□□ 1.17
BRF1-213ENST00000548421 WDR61Q9GZS3 305 aaKnown RBP22.37■■□□□ 1.17
BRF1-213ENST00000548421 WDR83OSQ9Y284 106 aa22.37■■□□□ 1.17
BRF1-213ENST00000548421 RNF114Q9Y508 228 aa22.37■■□□□ 1.17
BRF1-213ENST00000548421 S4R3C0 116 aa22.37■■□□□ 1.17
BRF1-213ENST00000548421 MFAP4P55083 255 aa22.36■■□□□ 1.17
BRF1-213ENST00000548421 RIPPLY3P57055 190 aa22.36■■□□□ 1.17
BRF1-213ENST00000548421 TEPPQ6URK8 271 aa22.36■■□□□ 1.17
BRF1-213ENST00000548421 MDKP21741 143 aaPredicted RBP22.35■■□□□ 1.17
BRF1-213ENST00000548421 FGF7P21781 194 aa22.35■■□□□ 1.17
BRF1-213ENST00000548421 OR4X2Q8NGF9 303 aa22.35■■□□□ 1.17
BRF1-213ENST00000548421 SCGB1C1Q8TD33 95 aa22.35■■□□□ 1.17
BRF1-213ENST00000548421 LSM4Q9Y4Z0 139 aaKnown RBP22.35■■□□□ 1.17
BRF1-213ENST00000548421 TRBV7-1A0A0A6YYK4 115 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 IGHV3-23P01764 117 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 RPLP1P05386 114 aaKnown RBP22.34■■□□□ 1.17
BRF1-213ENST00000548421 FCGR2BP31994 310 aaPredicted RBP22.34■■□□□ 1.17
BRF1-213ENST00000548421 NPBWR1P48145 328 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 EIF5AP63241 154 aaKnown RBP22.34■■□□□ 1.17
BRF1-213ENST00000548421 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP22.34■■□□□ 1.17
BRF1-213ENST00000548421 STOML3Q8TAV4 291 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 ZNF502Q8TBZ5 544 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 MYOZ3Q8TDC0 251 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 TXN2Q99757 166 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 A0A1B0GUS0 222 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 MPDU1O75352 247 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 CLN5O75503 358 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 TPT1P13693 172 aaKnown RBP22.34■■□□□ 1.17
BRF1-213ENST00000548421 Q56UQ5 140 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 BTNL8Q6UX41 500 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 THAP8Q8NA92 274 aa22.34■■□□□ 1.17
BRF1-213ENST00000548421 IGKV1OR2-108A0A075B7D4 117 aa22.33■■□□□ 1.16
BRF1-213ENST00000548421 PROK1P58294 105 aa22.33■■□□□ 1.16
BRF1-213ENST00000548421 HSD17B11Q8NBQ5 300 aa22.33■■□□□ 1.16
BRF1-213ENST00000548421 F8W735 103 aaPredicted RBP22.32■■□□□ 1.16
BRF1-213ENST00000548421 HAX1O00165 279 aa22.32■■□□□ 1.16
BRF1-213ENST00000548421 KIAA0141Q14154 515 aaPredicted RBP22.32■■□□□ 1.16
BRF1-213ENST00000548421 CCDC140Q96MF4 163 aa22.32■■□□□ 1.16
BRF1-213ENST00000548421 ATP6V0BQ99437 205 aa22.32■■□□□ 1.16
BRF1-213ENST00000548421 ARV1Q9H2C2 271 aa22.32■■□□□ 1.16
BRF1-213ENST00000548421 ZFP92A6NM28 416 aa22.31■■□□□ 1.16
BRF1-213ENST00000548421 GNG7O60262 68 aa22.31■■□□□ 1.16
BRF1-213ENST00000548421 ZNF491Q8N8L2 437 aa22.31■■□□□ 1.16
BRF1-213ENST00000548421 ST8SIA2Q92186 375 aa22.31■■□□□ 1.16
BRF1-213ENST00000548421 MGST2Q99735 147 aa22.31■■□□□ 1.16
BRF1-213ENST00000548421 GINS3Q9BRX5 216 aa22.31■■□□□ 1.16
BRF1-213ENST00000548421 NPCDR1Q9BY65 106 aa22.31■■□□□ 1.16
BRF1-213ENST00000548421 GAR1Q9NY12 217 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms