RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 PUS1Q9Y606 427 aaKnown RBP eCLIP11.32□□□□□ -0.6
SVOP-202ENST00000548229 TRAV18A0A075B6X5 111 aa11.31□□□□□ -0.6
SVOP-202ENST00000548229 SMIM9A6NGZ8 99 aa11.31□□□□□ -0.6
SVOP-202ENST00000548229 ZNF688P0C7X2 276 aa11.31□□□□□ -0.6
SVOP-202ENST00000548229 VCX3AQ9NNX9 186 aa11.31□□□□□ -0.6
SVOP-202ENST00000548229 NSG2Q9Y328 171 aa11.31□□□□□ -0.6
SVOP-202ENST00000548229 ALDH3B2P48448 385 aa11.3□□□□□ -0.6
SVOP-202ENST00000548229 HOGA1Q86XE5 327 aa11.3□□□□□ -0.6
SVOP-202ENST00000548229 PINX1Q96BK5 328 aaKnown RBP11.3□□□□□ -0.6
SVOP-202ENST00000548229 METTL26Q96S19 204 aa11.3□□□□□ -0.6
SVOP-202ENST00000548229 RAB40CQ96S21 281 aa11.3□□□□□ -0.6
SVOP-202ENST00000548229 NEU1Q99519 415 aa11.3□□□□□ -0.6
SVOP-202ENST00000548229 FUNDC2Q9BWH2 189 aa11.3□□□□□ -0.6
SVOP-202ENST00000548229 AUNIPQ9H7T9 357 aa11.3□□□□□ -0.6
SVOP-202ENST00000548229 TMED3Q9Y3Q3 217 aa11.3□□□□□ -0.6
SVOP-202ENST00000548229 SCGB2A1O75556 95 aa11.29□□□□□ -0.6
SVOP-202ENST00000548229 G6PCP35575 357 aa11.29□□□□□ -0.6
SVOP-202ENST00000548229 LPAR6P43657 344 aa11.29□□□□□ -0.6
SVOP-202ENST00000548229 HERV-K104P61576 105 aa11.29□□□□□ -0.6
SVOP-202ENST00000548229 NCS1P62166 190 aa11.29□□□□□ -0.6
SVOP-202ENST00000548229 ERHP84090 104 aaKnown RBP11.29□□□□□ -0.6
SVOP-202ENST00000548229 TMEM17Q86X19 198 aa11.29□□□□□ -0.6
SVOP-202ENST00000548229 DCANP1Q8TF63 244 aa11.29□□□□□ -0.6
SVOP-202ENST00000548229 FCAMRQ8WWV6 532 aa11.29□□□□□ -0.6
SVOP-202ENST00000548229 NAA50Q9GZZ1 169 aaKnown RBP11.29□□□□□ -0.6
SVOP-202ENST00000548229 ZFAND3Q9H8U3 227 aa11.29□□□□□ -0.6
SVOP-202ENST00000548229 IGHV3-48P01763 117 aa11.28□□□□□ -0.6
SVOP-202ENST00000548229 FCER2P06734 321 aa11.28□□□□□ -0.6
SVOP-202ENST00000548229 GNRHRP30968 328 aa11.28□□□□□ -0.6
SVOP-202ENST00000548229 P2RY1P47900 373 aa11.28□□□□□ -0.6
SVOP-202ENST00000548229 AP2S1P53680 142 aaPredicted RBP11.28□□□□□ -0.6
SVOP-202ENST00000548229 TNP2Q05952 138 aa11.28□□□□□ -0.6
SVOP-202ENST00000548229 CMTM1Q8IZ96 169 aa11.28□□□□□ -0.6
SVOP-202ENST00000548229 XCL2Q9UBD3 114 aa11.28□□□□□ -0.6
SVOP-202ENST00000548229 A0A0A6YYH2 397 aa11.27□□□□□ -0.61
SVOP-202ENST00000548229 HELTA6NFD8 242 aa11.27□□□□□ -0.61
SVOP-202ENST00000548229 A6NJ64 397 aa11.27□□□□□ -0.61
SVOP-202ENST00000548229 TMEM127O75204 238 aa11.27□□□□□ -0.61
SVOP-202ENST00000548229 PGLYRP1O75594 196 aaPredicted RBP11.27□□□□□ -0.61
SVOP-202ENST00000548229 RLN1P04808 185 aa11.27□□□□□ -0.61
SVOP-202ENST00000548229 CRYBB3P26998 211 aa11.27□□□□□ -0.61
SVOP-202ENST00000548229 RPL5P46777 297 aaKnown RBP11.27□□□□□ -0.61
SVOP-202ENST00000548229 VBP1P61758 197 aa11.27□□□□□ -0.61
SVOP-202ENST00000548229 SNRPD3P62318 126 aaKnown RBP11.27□□□□□ -0.61
SVOP-202ENST00000548229 OXA1LQ15070 435 aa11.27□□□□□ -0.61
SVOP-202ENST00000548229 OR5AP2Q8NGF4 316 aa11.27□□□□□ -0.61
SVOP-202ENST00000548229 OR4A16Q8NH70 328 aa11.27□□□□□ -0.61
SVOP-202ENST00000548229 NIPSNAP3BQ9BS92 247 aa11.27□□□□□ -0.61
SVOP-202ENST00000548229 MEIS3P1A6NDR6 274 aa11.26□□□□□ -0.61
SVOP-202ENST00000548229 TMEM50AO95807 157 aa11.26□□□□□ -0.61
SVOP-202ENST00000548229 CBX5P45973 191 aa11.26□□□□□ -0.61
SVOP-202ENST00000548229 EMP1P54849 157 aa11.26□□□□□ -0.61
SVOP-202ENST00000548229 PRCDQ00LT1 54 aa11.26□□□□□ -0.61
SVOP-202ENST00000548229 DHRS2Q13268 280 aa11.26□□□□□ -0.61
SVOP-202ENST00000548229 PSMG4Q5JS54 123 aa11.26□□□□□ -0.61
SVOP-202ENST00000548229 ZNF705AQ6ZN79 300 aaPredicted RBP11.26□□□□□ -0.61
SVOP-202ENST00000548229 SEPSECSQ9HD40 501 aaKnown RBP11.26□□□□□ -0.61
SVOP-202ENST00000548229 ANAPC10Q9UM13 185 aa11.26□□□□□ -0.61
SVOP-202ENST00000548229 RFNGQ9Y644 331 aa11.26□□□□□ -0.61
SVOP-202ENST00000548229 A0A1B0GU03 582 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 DBX1A6NMT0 343 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 CORTO00230 105 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 SNCAP37840 140 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 HOXA1P49639 335 aaPredicted RBP11.25□□□□□ -0.61
SVOP-202ENST00000548229 HSPE1P61604 102 aaKnown RBP11.25□□□□□ -0.61
SVOP-202ENST00000548229 CTF1Q16619 201 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 UBE2NLQ5JXB2 153 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 CROCCP3Q8IVE0 287 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 C6orf223Q8N319 242 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 SAMD12Q8N8I0 201 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 C15orf53Q8NAA6 179 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 ATG101Q9BSB4 218 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 DIABLOQ9NR28 239 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 FAM212BQ9NTI7 297 aaPredicted RBP11.25□□□□□ -0.61
SVOP-202ENST00000548229 DKK2Q9UBU2 259 aa11.25□□□□□ -0.61
SVOP-202ENST00000548229 ZNF705FA8MVS1 300 aaPredicted RBP11.24□□□□□ -0.61
SVOP-202ENST00000548229 ZNF705DP0CH99 300 aaPredicted RBP11.24□□□□□ -0.61
SVOP-202ENST00000548229 ZNF705BP0CI00 300 aaPredicted RBP11.24□□□□□ -0.61
SVOP-202ENST00000548229 S100GP29377 79 aa11.24□□□□□ -0.61
SVOP-202ENST00000548229 TAS2R20P59543 309 aa11.24□□□□□ -0.61
SVOP-202ENST00000548229 DHRS11Q6UWP2 260 aa11.24□□□□□ -0.61
SVOP-202ENST00000548229 GPR141Q7Z602 305 aa11.24□□□□□ -0.61
SVOP-202ENST00000548229 TMEM230Q96A57 120 aa11.24□□□□□ -0.61
SVOP-202ENST00000548229 NACAE9PAV3 2078 aa11.24□□□□□ -0.61
SVOP-202ENST00000548229 H3BMM0 161 aa11.23□□□□□ -0.61
SVOP-202ENST00000548229 NAT1P18440 290 aa11.23□□□□□ -0.61
SVOP-202ENST00000548229 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
SVOP-202ENST00000548229 H2BFWTQ7Z2G1 175 aa11.23□□□□□ -0.61
SVOP-202ENST00000548229 S100A16Q96FQ6 103 aaKnown RBP11.23□□□□□ -0.61
SVOP-202ENST00000548229 NBDYA0A0U1RRE5 68 aa11.22□□□□□ -0.61
SVOP-202ENST00000548229 GABARAPO95166 117 aa11.22□□□□□ -0.61
SVOP-202ENST00000548229 HTN3P15516 51 aa11.22□□□□□ -0.61
SVOP-202ENST00000548229 FAM222AQ5U5X8 452 aa11.22□□□□□ -0.61
SVOP-202ENST00000548229 GPR107Q5VW38 600 aa11.22□□□□□ -0.61
SVOP-202ENST00000548229 TMEM88Q6PEY1 159 aa11.22□□□□□ -0.61
SVOP-202ENST00000548229 LYSMD2Q8IV50 215 aa11.22□□□□□ -0.61
SVOP-202ENST00000548229 EHFQ9NZC4 300 aa11.22□□□□□ -0.61
SVOP-202ENST00000548229 COMMD3Q9UBI1 195 aa11.22□□□□□ -0.61
SVOP-202ENST00000548229 TRAV30A0A087WSZ9 112 aa11.21□□□□□ -0.61
SVOP-202ENST00000548229 GPR31O00270 319 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms