RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 LCN12Q6JVE5 192 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 OR4A5Q8NH83 315 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 MCRIP2Q9BUT9 160 aaKnown RBP10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 USP9YO00507 2555 aaPredicted RBP10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 A0A087WWC5 75 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 WIPF3A6NGB9 483 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 F2RL2O00254 374 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 CTSSP25774 331 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 CFPP27918 469 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 TAS2R60P59551 318 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 SELENOTP62341 195 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 FOXF2Q12947 444 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 SFTA2Q6UW10 78 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 LINC01560Q8TB33 94 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 NDUFAF3Q9BU61 184 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 PROK2Q9HC23 129 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 IL36BQ9NZH7 164 aa10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 SPTBN5Q9NRC6 3674 aaKnown RBP10.78□□□□□ -0.68
TUBGCP2-210ENST00000543663 FOLR2P14207 255 aa10.77□□□□□ -0.68
TUBGCP2-210ENST00000543663 PNKDQ8N490 385 aa10.77□□□□□ -0.68
TUBGCP2-210ENST00000543663 OR4C13Q8NGP0 309 aa10.77□□□□□ -0.68
TUBGCP2-210ENST00000543663 SCNM1Q9BWG6 230 aa10.77□□□□□ -0.68
TUBGCP2-210ENST00000543663 HIGD1CA8MV81 97 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 VENTXO95231 258 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 PSMB2P49721 201 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 NAA38Q9BRA0 125 aaKnown RBP10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 MRPL20Q9BYC9 149 aaKnown RBP10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 SEPSECSQ9HD40 501 aaKnown RBP10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 LOC107984156A0A0G2JMH3 177 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 C7orf71A4D174 169 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 TIMP3P35625 211 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 GPX4P36969 197 aaPredicted RBP10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 KIR2DL2P43627 348 aaPredicted RBP10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 NMSQ5H8A3 153 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 ARL17AQ8IVW1 177 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 TMEM208Q9BTX3 173 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 AHRRA9YTQ3 701 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 ETV2O00321 342 aaPredicted RBP10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 IGKV3-20P01619 116 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 ZNF883P0CG24 379 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 MPZP25189 248 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 JOSD1Q15040 202 aaPredicted RBP10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 GCSAMQ8N6F7 178 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 DEFB104AQ8WTQ1 72 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 TXNDC17Q9BRA2 123 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 LINC00470Q9BZP3 86 aa10.77□□□□□ -0.69
TUBGCP2-210ENST00000543663 SORL1Q92673 2214 aa10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 ASPHD1Q5U4P2 390 aa10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 TMEM106BQ9NUM4 274 aa10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 MGAQ8IWI9 3026 aa10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 IGHV2OR16-5A0A0B4J2B6 119 aa10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 OR2T8A6NH00 312 aa10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 WDR82Q6UXN9 313 aa10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 C1orf147Q96MC9 270 aaPredicted RBP10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 ASCL2Q99929 193 aa10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 SAA2-SAA4A0A096LPE2 208 aa10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 SAA2P0DJI9 122 aaPredicted RBP10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 LOXL4Q96JB6 756 aa10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 IFI27L2Q9H2X8 130 aa10.76□□□□□ -0.69
TUBGCP2-210ENST00000543663 TRAV8-6A0A0B4J262 113 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 K7ERU9 68 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 GZMBP10144 247 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 LCN2P80188 198 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 C1orf185Q5T7R7 199 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 AP5S1Q9NUS5 200 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 CDX4O14627 284 aaPredicted RBP10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 FOXH1O75593 365 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 TMEM170AQ8WVE7 144 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 LSM4Q9Y4Z0 139 aaKnown RBP10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 PPIAL4CA0A0B4J2A2 164 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 FOXI3A8MTJ6 420 aaPredicted RBP10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 PPIAL4GP0DN37 164 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 PPIFP30405 207 aaKnown RBP10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 EFNB3Q15768 340 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 ZNF497Q6ZNH5 498 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 DTX1Q86Y01 620 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 SLC25A33Q9BSK2 321 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 ZNRD1Q9P1U0 126 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 A6NDN8 102 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 CIDEAO60543 219 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 LBHQ53QV2 105 aaPredicted RBP10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 CRIM1Q9NZV1 1036 aa10.75□□□□□ -0.69
TUBGCP2-210ENST00000543663 SAA1P0DJI8 122 aaPredicted RBP10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 RSPO1Q2MKA7 263 aaPredicted RBP10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 SPSB3Q6PJ21 355 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 TMEM136Q6ZRR5 245 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 LRTM2Q8N967 370 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 MYOZ3Q8TDC0 251 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 LINC00479Q96M42 142 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 FOXA2Q9Y261 457 aaPredicted RBP10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 IGKV1-6A0A0C4DH72 117 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 HLA-DRB1P01911 266 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 FXYD7P58549 80 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 MORN2Q502X0 79 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 TEX38Q6PEX7 206 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 CHD3Q12873 2000 aaKnown RBP10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 LINC00473A8K010 186 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 MC5RP33032 325 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 ZNF146Q15072 292 aa10.74□□□□□ -0.69
TUBGCP2-210ENST00000543663 TBR1Q16650 682 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms