RNA–Protein interactions for RNA: ENST00000542846.5

LRTOMT-220, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-220ENST00000542846 HSPB7Q9UBY9 170 aa4.72□□□□□ -1.65
LRTOMT-220ENST00000542846 U3KQK5 164 aa4.72□□□□□ -1.65
LRTOMT-220ENST00000542846 DYNC2H1Q8NCM8 4307 aaKnown RBP4.71□□□□□ -1.65
LRTOMT-220ENST00000542846 A0A1B0GU03 582 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 RPS10-NUDT3A0A1W2PQS6 291 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 CENPXA8MT69 81 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 NDUFB6O95139 128 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 SFT2D2O95562 160 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 TMEM50AO95807 157 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 IGHV3-48P01763 117 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 CD7P09564 240 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 SLC25A6P12236 298 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 VAMP1P23763 118 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 BTCP35070 178 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 OPRK1P41145 380 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 TNFRSF9Q07011 255 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 PPP1R1AQ13522 171 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 GUCA2BQ16661 112 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 ANKRD55Q3KP44 614 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 NOXA1Q86UR1 476 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 SBSPONQ8IVN8 264 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 OR4X1Q8NH49 305 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 RNASEH2CQ8TDP1 164 aaKnown RBP4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 TMEM170AQ8WVE7 144 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 OR10C1Q96KK4 312 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 SPAG8Q99932 426 aaPredicted RBP4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 C20orf24Q9BUV8 137 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 HIPK2Q9H2X6 1198 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 FNDC4Q9H6D8 234 aaPredicted RBP4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 TMED3Q9Y3Q3 217 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 STAB2Q8WWQ8 2551 aa4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 KMT2CQ8NEZ4 4911 aaKnown RBP4.71□□□□□ -1.66
LRTOMT-220ENST00000542846 SACSQ9NZJ4 4579 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 IGHV3OR16-8A0A075B7F1 116 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 IGHV7-4-1A0A0J9YVY3 117 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 FAM90A26D6RGX4 464 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 TSPAN4O14817 238 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 PITX3O75364 302 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 CLN5O75503 358 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 SCGB2A1O75556 95 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 YIF1AO95070 293 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 SCAF4O95104 1147 aaKnown RBP4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 NXPH3O95157 252 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 SLC25A4P12235 298 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 NPY1RP25929 384 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 ATP5IP56385 69 aaPredicted RBP4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 CNPY1Q3B7I2 92 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 LAMTOR1Q6IAA8 161 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 TOMM20LQ6UXN7 152 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 LINC00322Q6ZN03 302 aaPredicted RBP4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 ZNF600Q6ZNG1 722 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 RBPMS2Q6ZRY4 209 aaKnown RBP4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 SLC16A13Q7RTY0 426 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 OR52B4Q8NGK2 314 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 OR1S1Q8NH92 325 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 DTD1Q8TEA8 209 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 WWC2-AS2Q96NR7 200 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 TM2D3Q9BRN9 247 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 GINS3Q9BRX5 216 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 CCDC32Q9BV29 185 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 RBKSQ9H477 322 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 TUBA4BQ9H853 241 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 ZMAT4Q9H898 229 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 ZFAND3Q9H8U3 227 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 MRPL36Q9P0J6 103 aaKnown RBP4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 SMPXQ9UHP9 88 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 SELENOKQ9Y6D0 94 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 U3KQ87 197 aa4.7□□□□□ -1.66
LRTOMT-220ENST00000542846 TENM3Q9P273 2699 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 TRAV30A0A087WSZ9 112 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 TRAV14DV4A0A0A6YYC5 116 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 LINC00854A0A1B0GVQ3 168 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 C9orf170A2RU37 121 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 OR11H12B2RN74 326 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 CHEK1O14757 476 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 PLA2G10O15496 165 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 ZNF207O43670 478 aaKnown RBP4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 IFNA10P01566 189 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 HOXB5P09067 269 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 OR4E1P0C645 316 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 BMI1P35226 326 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 RND2P52198 227 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 DHRS2Q13268 280 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 MLANAQ16655 118 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 HAGHQ16775 308 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 ETFRF1Q6IPR1 90 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 PRSS54Q6PEW0 395 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 LYG2Q86SG7 212 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 DEFB125Q8N687 156 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 TMEM116Q8NCL8 245 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 OR1S2Q8NGQ3 325 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 COQ8AQ8NI60 647 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 RCHY1Q96PM5 261 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 SPATA25Q9BR10 227 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 RHPN1-AS1Q9BWJ2 59 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 WFDC10AQ9H1F0 79 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 FLVCR2Q9UPI3 526 aa4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 PUS1Q9Y606 427 aaKnown RBP eCLIP4.69□□□□□ -1.66
LRTOMT-220ENST00000542846 RBMY1BA6NDE4 496 aaKnown RBP4.68□□□□□ -1.66
LRTOMT-220ENST00000542846 RBMY1EA6NEQ0 496 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms