RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 POLR2IP36954 125 aaKnown RBP2.07□□□□□ -2.08
CHD4-209ENST00000542717 HLA-DRB3P79483 266 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 CCDC58Q4VC31 144 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 SPATA31B1PQ5VZV4 182 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 KDM4DQ6B0I6 523 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 AWAT2Q6E213 333 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 ZNF493Q6ZR52 646 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 MOB1BQ7L9L4 216 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 LHFPL3Q86UP9 236 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 SPATA24Q86W54 205 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 CCDC28AQ8IWP9 274 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 CDH26Q8IXH8 852 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 BAP18Q8IXM2 172 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 JAGN1Q8N5M9 183 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 MS4A15Q8N5U1 240 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 OR10W1Q8NGF6 305 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 OR52E5Q8NH55 327 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 PCNPQ8WW12 178 aaKnown RBP2.07□□□□□ -2.08
CHD4-209ENST00000542717 GTSF1Q8WW33 167 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 TRUB1Q8WWH5 349 aaKnown RBP2.07□□□□□ -2.08
CHD4-209ENST00000542717 TMEM203Q969S6 136 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 MUL1Q969V5 352 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 TMEM230Q96A57 120 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 PINX1Q96BK5 328 aaKnown RBP2.07□□□□□ -2.08
CHD4-209ENST00000542717 CCDC124Q96CT7 223 aaKnown RBP2.07□□□□□ -2.08
CHD4-209ENST00000542717 FAAP24Q9BTP7 215 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 GABARAPL3Q9BY60 117 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 GABARAPL1Q9H0R8 117 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 CDIP1Q9H305 208 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 MED4Q9NPJ6 270 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 IMPAD1Q9NX62 359 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 CKLFQ9UBR5 152 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 PSORS1C2Q9UIG4 136 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 PSORS1C1Q9UIG5 152 aa2.07□□□□□ -2.08
CHD4-209ENST00000542717 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.07□□□□□ -2.08
CHD4-209ENST00000542717 TRAV12-2A0A075B6T6 113 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 TRAV8-7A0A075B6U6 113 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 TCRBV3S1A0A5B6 114 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 SNTNA6NMZ2 147 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 CCSO14618 274 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 BET1O15155 118 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 PRAF2O60831 178 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 BPNT1O95861 308 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 HRASP01112 189 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 ALPLP05186 524 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 SERPINE2P07093 398 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 TRAPPC2P0DI81 140 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 TRAPPC2BP0DI82 140 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 ZNF182P17025 639 aaPredicted RBP2.06□□□□□ -2.08
CHD4-209ENST00000542717 VAMP1P23763 118 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 ETV6P41212 452 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 NPBWR1P48145 328 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 SERPINB10P48595 397 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 GTF2A1P52655 376 aaPredicted RBP2.06□□□□□ -2.08
CHD4-209ENST00000542717 PPP5CP53041 499 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 TAS2R60P59551 318 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 PRCDQ00LT1 54 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 ACSM3Q53FZ2 586 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 IGSF11Q5DX21 431 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 MEDAGQ5VYS4 303 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 RPL22L1Q6P5R6 122 aaKnown RBP2.06□□□□□ -2.08
CHD4-209ENST00000542717 SIGLEC15Q6ZMC9 328 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 KCTD9Q7L273 389 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 C6orf201Q7Z4U5 140 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 HSD17B13Q7Z5P4 300 aaPredicted RBP2.06□□□□□ -2.08
CHD4-209ENST00000542717 GPR141Q7Z602 305 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 PUSL1Q8N0Z8 303 aaKnown RBP2.06□□□□□ -2.08
CHD4-209ENST00000542717 ZNF664Q8N3J9 261 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 THAP8Q8NA92 274 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 OR4S2Q8NH73 311 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 ATP6V0E2Q8NHE4 81 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 TMEM263Q8WUH6 116 aaKnown RBP2.06□□□□□ -2.08
CHD4-209ENST00000542717 ORAI1Q96D31 301 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 C5orf30Q96GV9 206 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 ZC2HC1AQ96GY0 325 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 CIB1Q99828 191 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 QTRT1Q9BXR0 403 aaKnown RBP2.06□□□□□ -2.08
CHD4-209ENST00000542717 ZFAND3Q9H8U3 227 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 PLEKHJ1Q9NW61 149 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 PPP1R14DQ9NXH3 145 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 BOLA1Q9Y3E2 137 aa2.06□□□□□ -2.08
CHD4-209ENST00000542717 F11RQ9Y624 299 aaKnown RBP2.06□□□□□ -2.08
CHD4-209ENST00000542717 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
CHD4-209ENST00000542717 TRAV8-3A0A0A6YYJ7 113 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 IGKV1-6A0A0C4DH72 117 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 TRBV5-5A0A0J9YX44 114 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 A0A1B0GU03 582 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 RNF222A6NCQ9 220 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 TRDCB7Z8K6 153 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 E5RGE8 158 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 SCGB2A1O75556 95 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 MT-CO2P00403 227 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 IGHV3-53P01767 116 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 HNRNPCP07910 306 aaKnown RBP eCLIP2.05□□□□□ -2.08
CHD4-209ENST00000542717 CD3GP09693 182 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 CHTF8P0CG12 524 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 UBBP0CG47 229 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 LIMS3P0CW19 117 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 LIMS4P0CW20 117 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms