RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 LINC00862A6NCI5 91 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 ZNF705EA8MWA4 302 aaPredicted RBP10.38□□□□□ -0.75
CHFR-221ENST00000542714 CD99P14209 185 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 OR10J1P30954 320 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 CAMLGP49069 296 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 ELLP55199 621 aaPredicted RBP10.38□□□□□ -0.75
CHFR-221ENST00000542714 RAB2AP61019 212 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 RAB14P61106 215 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 SERF2P84101 59 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 TMEM95Q3KNT9 176 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 FFAR4Q5NUL3 377 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 TMEM86BQ8N661 226 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 LRRC20Q8TCA0 184 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 NOL4LQ96MY1 436 aaPredicted RBP10.38□□□□□ -0.75
CHFR-221ENST00000542714 DUX5Q96PT3 197 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 ZNF702PQ9H963 129 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 ZNF580Q9UK33 172 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 SLC45A2Q9UMX9 530 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 SONP18583 2426 aaKnown RBP10.38□□□□□ -0.75
CHFR-221ENST00000542714 OTOGQ6ZRI0 2925 aa10.38□□□□□ -0.75
CHFR-221ENST00000542714 ZFHX3Q15911 3703 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 TRBV9A0A0B4J1U6 114 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 MFSD2BA6NFX1 497 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 DNAJC9-AS1A6NH13 148 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 CYSRT1A8MQ03 144 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 UMAD1C9J7I0 102 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 C17orf112F2Z3M2 114 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 TRIM77I1YAP6 450 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 OR2J3O76001 311 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 YIF1AO95070 293 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 LINC00869P0C866 280 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 FOSL1P15407 271 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 RAB5CP51148 216 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 PRR20EP86478 221 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 PRR20CP86479 221 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 PRR20DP86480 221 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 PRR20BP86481 221 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 PRR20AP86496 221 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 CFHR3Q02985 330 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 TMEM41BQ5BJD5 291 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 AKR1C8PQ5T2L2 129 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 PXDC1Q5TGL8 231 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 Q6ZRG5 221 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 SLC7A5P1Q8MH63 180 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 ZNF709Q8N972 641 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 TMEM116Q8NCL8 245 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 SAT2Q96F10 170 aaPredicted RBP10.37□□□□□ -0.75
CHFR-221ENST00000542714 GSX1Q9H4S2 264 aaPredicted RBP10.37□□□□□ -0.75
CHFR-221ENST00000542714 ESM1Q9NQ30 184 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 RPRMQ9NS64 109 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 PXMP4Q9Y6I8 212 aa10.37□□□□□ -0.75
CHFR-221ENST00000542714 F8W735 103 aaPredicted RBP10.36□□□□□ -0.75
CHFR-221ENST00000542714 AP4M1O00189 453 aa10.36□□□□□ -0.75
CHFR-221ENST00000542714 HIST1H1BP16401 226 aaKnown RBP10.36□□□□□ -0.75
CHFR-221ENST00000542714 PPIFP30405 207 aaKnown RBP10.36□□□□□ -0.75
CHFR-221ENST00000542714 RPL29P47914 159 aaKnown RBP10.36□□□□□ -0.75
CHFR-221ENST00000542714 ZNF726P1Q15940 193 aa10.36□□□□□ -0.75
CHFR-221ENST00000542714 GCSAMLQ5JQS6 135 aa10.36□□□□□ -0.75
CHFR-221ENST00000542714 CYP2G1PQ6ZSU1 146 aa10.36□□□□□ -0.75
CHFR-221ENST00000542714 SSX7Q7RTT5 188 aa10.36□□□□□ -0.75
CHFR-221ENST00000542714 STPG3Q8N7X2 389 aa10.36□□□□□ -0.75
CHFR-221ENST00000542714 OR4X1Q8NH49 305 aa10.36□□□□□ -0.75
CHFR-221ENST00000542714 FAM213BQ8TBF2 198 aa10.36□□□□□ -0.75
CHFR-221ENST00000542714 FBXL7Q9UJT9 491 aa10.36□□□□□ -0.75
CHFR-221ENST00000542714 S4R3C0 116 aa10.36□□□□□ -0.75
CHFR-221ENST00000542714 NOTCH2Q04721 2471 aa10.36□□□□□ -0.75
CHFR-221ENST00000542714 BAHCC1Q9P281 2608 aa10.36□□□□□ -0.75
CHFR-221ENST00000542714 TEX46H3BTG2 121 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 TSPAN9O75954 239 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 TSPAN15O95858 294 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 IGLC1P0CG04 106 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 GATA2P23769 480 aaPredicted RBP10.35□□□□□ -0.75
CHFR-221ENST00000542714 BLOC1S1P78537 153 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 RHOGP84095 191 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 ZNF90Q03938 601 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 RAB31Q13636 194 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 DPPA3Q6W0C5 159 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 BPIFCQ8NFQ6 507 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 LYPD6BQ8NI32 183 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 TRGV9Q99603 122 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 NPFFR1Q9GZQ6 430 aa10.35□□□□□ -0.75
CHFR-221ENST00000542714 TCRBV4S1A1TA0A5B7 111 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 CYB5BO43169 146 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 CLN5O75503 358 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 BRI3O95415 125 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 SRD5A1P18405 259 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 B2MP61769 119 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 NDUFA5Q16718 116 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 SPSB3Q6PJ21 355 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 RBMS3Q6XE24 437 aaKnown RBP10.34□□□□□ -0.75
CHFR-221ENST00000542714 Q71RC1 249 aaPredicted RBP10.34□□□□□ -0.75
CHFR-221ENST00000542714 Q8N2B8 174 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 RPP25LQ8N5L8 163 aaKnown RBP10.34□□□□□ -0.75
CHFR-221ENST00000542714 VN1R17PQ8TDU5 208 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 RCC1LQ96I51 464 aaKnown RBP10.34□□□□□ -0.75
CHFR-221ENST00000542714 MS4A10Q96PG2 267 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 PRSS22Q9GZN4 317 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 KCNIP2Q9NS61 270 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 SLC39A9Q9NUM3 307 aa10.34□□□□□ -0.75
CHFR-221ENST00000542714 MED9Q9NWA0 146 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms