RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 C2orf83Q53S99 150 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 GGNBP1Q5YKI7 109 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 LINC00299Q6ZSB3 139 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 SBSPONQ8IVN8 264 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 OR52B4Q8NGK2 314 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 C7orf50Q9BRJ6 194 aaKnown RBP7.32□□□□□ -1.24
YBX3-212ENST00000542002 ENY2Q9NPA8 101 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 TBC1D24Q9ULP9 559 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 SMAD5-AS1Q9Y6J3 95 aa7.32□□□□□ -1.24
YBX3-212ENST00000542002 CENPXA8MT69 81 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 CD7P09564 240 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 FRMD6-AS1P0C7T7 363 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 IGHV4-30-4P0DP06 118 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 HTR2BP41595 481 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 SUB1P53999 127 aaKnown RBP eCLIP7.31□□□□□ -1.24
YBX3-212ENST00000542002 ELLP55199 621 aaPredicted RBP7.31□□□□□ -1.24
YBX3-212ENST00000542002 UBE2MP61081 183 aaKnown RBP7.31□□□□□ -1.24
YBX3-212ENST00000542002 CD69Q07108 199 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 BTNL8Q6UX41 500 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 TOMM20LQ6UXN7 152 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 TMEM61Q8N0U2 210 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 LILRB2Q8N423 598 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 DUSP18Q8NEJ0 188 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 OR2K2Q8NGT1 345 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 OR1S1Q8NH92 325 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 DTD1Q8TEA8 209 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 OR10C1Q96KK4 312 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 C20orf24Q9BUV8 137 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 CCDC32Q9BV29 185 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 C19orf73Q9NVV2 129 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 TECRQ9NZ01 308 aaKnown RBP7.31□□□□□ -1.24
YBX3-212ENST00000542002 MRPL27Q9P0M9 148 aaKnown RBP7.31□□□□□ -1.24
YBX3-212ENST00000542002 UFC1Q9Y3C8 167 aa7.31□□□□□ -1.24
YBX3-212ENST00000542002 IGHV3-49A0A0A0MS15 119 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 DUXBA0A1W2PPF3 345 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 K7EMT4 169 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 NUPL2O15504 423 aaKnown RBP7.3□□□□□ -1.24
YBX3-212ENST00000542002 GNG7O60262 68 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 CLN5O75503 358 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 SCAF4O95104 1147 aaKnown RBP7.3□□□□□ -1.24
YBX3-212ENST00000542002 IGKV1-17P01599 117 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 APOHP02749 345 aaPredicted RBP7.3□□□□□ -1.24
YBX3-212ENST00000542002 TCRBP04435 133 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 SLC25A6P12236 298 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 OPRK1P41145 380 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 LCN12Q6JVE5 192 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 PRSS54Q6PEW0 395 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 LYG2Q86SG7 212 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 SLC24A4Q8NFF2 622 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 OR4X1Q8NH49 305 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 DYNLRB2Q8TF09 96 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 MAGT1Q9H0U3 335 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 WFDC10AQ9H1F0 79 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 C20orf85Q9H1P6 137 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 HIPK2Q9H2X6 1198 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 ZFAND3Q9H8U3 227 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 PALMDQ9NP74 551 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 DAZ1Q9NQZ3 744 aaKnown RBP7.3□□□□□ -1.24
YBX3-212ENST00000542002 PTTG2Q9NZH5 202 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 TMED3Q9Y3Q3 217 aa7.3□□□□□ -1.24
YBX3-212ENST00000542002 TRAV6A0A075B6T7 132 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 IGHV3OR16-13A0A075B7E8 117 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 IGHV3-74A0A0B4J1X5 117 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 C15orf62A8K5M9 175 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 A8MZ25 164 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 CORTO00230 105 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 YIF1AO95070 293 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 IFNA10P01566 189 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 IAPPP10997 89 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 NPY1RP25929 384 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 NPBWR1P48145 328 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 SMCPP49901 116 aaPredicted RBP7.29□□□□□ -1.24
YBX3-212ENST00000542002 ID3Q02535 119 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 GUCA2BQ16661 112 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 TIGITQ495A1 244 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 C4orf46Q504U0 113 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 RNASEH2CQ8TDP1 164 aaKnown RBP7.29□□□□□ -1.24
YBX3-212ENST00000542002 S100ZQ8WXG8 99 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 MARC2Q969Z3 335 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 RNF2Q99496 336 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 BATF3Q9NR55 127 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 GAR1Q9NY12 217 aaKnown RBP7.29□□□□□ -1.24
YBX3-212ENST00000542002 SMPXQ9UHP9 88 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 PUS1Q9Y606 427 aaKnown RBP eCLIP7.29□□□□□ -1.24
YBX3-212ENST00000542002 U3KQ87 197 aa7.29□□□□□ -1.24
YBX3-212ENST00000542002 IGHV7-4-1A0A0J9YVY3 117 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 CHEK1O14757 476 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 IGLC1P0CG04 106 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 RND2P52198 227 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 CD81P60033 236 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 RELQ04864 619 aaPredicted RBP7.28□□□□□ -1.24
YBX3-212ENST00000542002 DCTN2Q13561 401 aaKnown RBP7.28□□□□□ -1.24
YBX3-212ENST00000542002 LINC00322Q6ZN03 302 aaPredicted RBP7.28□□□□□ -1.24
YBX3-212ENST00000542002 DEFB125Q8N687 156 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 TMEM116Q8NCL8 245 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 OR4D5Q8NGN0 318 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 MITD1Q8WV92 249 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 NPIPB3Q92617 1050 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 NEURL2Q9BR09 285 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 SEC22CQ9BRL7 303 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms