RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 IGKV6D-21A0A0A0MT36 114 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 TRAV2A0A0B4J234 112 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 TRAV8-2A0A0B4J237 113 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 LOC107984640A0A0U1RRK4 108 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 LOC107986453A0A1B0GWG9 222 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 A0A1W2PQH9 124 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 A0A1W2PRX2 142 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 A8MWL6 223 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 UPK3BL1B0FP48 263 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 UPK3BL2E5RIL1 263 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 OVOL1O14753 267 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 IGHMP01871 453 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 MGST1P10620 155 aaKnown RBP4.25□□□□□ -1.73
SNHG1-218ENST00000541615 PSMB8P28062 276 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 HLA-DMBP28068 263 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 INSL3P51460 131 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 SRYQ05066 204 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 C12orf74Q32Q52 190 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 Q6ZS46 218 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 LINC00336Q6ZUF6 198 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 MEX3DQ86XN8 651 aaKnown RBP4.25□□□□□ -1.73
SNHG1-218ENST00000541615 PDPNQ86YL7 162 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 AMN1Q8IY45 258 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 TMEM86BQ8N661 226 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 IL1F10Q8WWZ1 152 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 IGFBPL1Q8WX77 278 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 TMEM158Q8WZ71 300 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 SCAMP4Q969E2 229 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 SRSF8Q9BRL6 282 aaKnown RBP4.25□□□□□ -1.73
SNHG1-218ENST00000541615 C1QTNF5Q9BXJ0 243 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 MRPL20Q9BYC9 149 aaKnown RBP4.25□□□□□ -1.73
SNHG1-218ENST00000541615 PRR13Q9NZ81 148 aa4.25□□□□□ -1.73
SNHG1-218ENST00000541615 TRAV27A0A087WT01 109 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 TMED7-TICAM2A0A0A6YYA0 188 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 TRAV8-4A0A0B4J246 113 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 IGKV6-21A0A0C4DH24 114 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 A0A1B0GVT2 93 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 A0A1W2PQU0 124 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 TCRBV4S1A1TA0A5B7 111 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 PAX4O43316 350 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 HOXA3O43365 443 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-218ENST00000541615 LYPD3O95274 346 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 CLDN7O95471 211 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 RBP4P02753 201 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 HMGN2P05204 90 aaKnown RBP4.24□□□□□ -1.73
SNHG1-218ENST00000541615 B4GALT1P15291 398 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 COX7CP15954 63 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 RPL13AP40429 203 aaKnown RBP4.24□□□□□ -1.73
SNHG1-218ENST00000541615 CXCL5P42830 114 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 NCBP2P52298 156 aaKnown RBP eCLIP4.24□□□□□ -1.73
SNHG1-218ENST00000541615 CLDN2P57739 230 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 NXPH1P58417 271 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 EFEMP1Q12805 493 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 TRIP6Q15654 476 aaKnown RBP4.24□□□□□ -1.73
SNHG1-218ENST00000541615 CR1LQ2VPA4 569 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 ZNF718Q3SXZ3 478 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 ANXA2RQ3ZCQ2 193 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 FAM120AOSQ5T036 256 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 C9orf57Q5W0N0 161 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 TMEM200BQ69YZ2 307 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 DGAT2L6Q6ZPD8 337 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 Q6ZT83 130 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 NFE4Q86UQ8 179 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 RPRMLQ8N4K4 120 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 PFN4Q8NHR9 129 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 ZPLD1Q8TCW7 415 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 DPH3Q96FX2 82 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 AJUBAQ96IF1 538 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 C9orf85Q96MD7 179 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 TTTY10Q9BZA0 68 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 NHP2Q9NX24 153 aaKnown RBP4.24□□□□□ -1.73
SNHG1-218ENST00000541615 PSENENQ9NZ42 101 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 KLK14Q9P0G3 267 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 ZNF256Q9Y2P7 627 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-218ENST00000541615 RAXQ9Y2V3 346 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 TICRRQ7Z2Z1 1910 aa4.24□□□□□ -1.73
SNHG1-218ENST00000541615 IGLV3-16A0A075B6K0 115 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 TRAV4A0A0B4J268 109 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 TMEM89A2RUT3 159 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 ZNF785A8K8V0 405 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 F8W735 103 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-218ENST00000541615 ATOX1O00244 68 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 SYNGR2O43760 224 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 SRSF10O75494 262 aaKnown RBP4.23□□□□□ -1.73
SNHG1-218ENST00000541615 NPYP01303 97 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 PF4P02776 101 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 RPL35AP18077 110 aaKnown RBP4.23□□□□□ -1.73
SNHG1-218ENST00000541615 CRYGSP22914 178 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 NPPCP23582 126 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 HOXD9P28356 352 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-218ENST00000541615 CCL23P55773 120 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 CD164Q04900 197 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 SLC38A11Q08AI6 406 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 C1orf61Q13536 156 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 SLC48A1Q6P1K1 146 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 RNF44Q7L0R7 432 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 OR5AS1Q8N127 324 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 RND1Q92730 232 aa4.23□□□□□ -1.73
SNHG1-218ENST00000541615 ZNF689Q96CS4 500 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-218ENST00000541615 ZC2HC1AQ96GY0 325 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms