RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 TENM3Q9P273 2699 aa9.88□□□□□ -0.83
LTBR-208ENST00000541005 TRAV25A0A0B4J276 109 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 CEBPZOSA8MTT3 80 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 GNG7O60262 68 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 IGHV3-48P01763 117 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 FRMD6-AS1P0C7T7 363 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 IGHV4-30-4P0DP06 118 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 OPRK1P41145 380 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 NPBWR1P48145 328 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 TMEM61Q8N0U2 210 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 OR4X1Q8NH49 305 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 RNASEH2CQ8TDP1 164 aaKnown RBP9.87□□□□□ -0.83
LTBR-208ENST00000541005 TMEM170AQ8WVE7 144 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 C19orf73Q9NVV2 129 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 TMED3Q9Y3Q3 217 aa9.87□□□□□ -0.83
LTBR-208ENST00000541005 RPS10-NUDT3A0A1W2PQS6 291 aa9.86□□□□□ -0.83
LTBR-208ENST00000541005 C9orf170A2RU37 121 aa9.86□□□□□ -0.83
LTBR-208ENST00000541005 FAM90A26D6RGX4 464 aa9.86□□□□□ -0.83
LTBR-208ENST00000541005 PLA2G10O15496 165 aa9.86□□□□□ -0.83
LTBR-208ENST00000541005 NPY1RP25929 384 aa9.86□□□□□ -0.83
LTBR-208ENST00000541005 C11orf87Q6NUJ2 197 aa9.86□□□□□ -0.83
LTBR-208ENST00000541005 BTNL8Q6UX41 500 aa9.86□□□□□ -0.83
LTBR-208ENST00000541005 NOXA1Q86UR1 476 aa9.86□□□□□ -0.83
LTBR-208ENST00000541005 S100ZQ8WXG8 99 aa9.86□□□□□ -0.83
LTBR-208ENST00000541005 WDR89Q96FK6 387 aaPredicted RBP9.86□□□□□ -0.83
LTBR-208ENST00000541005 HIPK2Q9H2X6 1198 aa9.86□□□□□ -0.83
LTBR-208ENST00000541005 MRPL36Q9P0J6 103 aaKnown RBP9.86□□□□□ -0.83
LTBR-208ENST00000541005 LINC00854A0A1B0GVQ3 168 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 LYRM1O43325 122 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 CLN5O75503 358 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 NXPH3O95157 252 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 TMEM50AO95807 157 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 SLC25A4P12235 298 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 ATP5IP56385 69 aaPredicted RBP9.85□□□□□ -0.83
LTBR-208ENST00000541005 DHRS2Q13268 280 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 LYG2Q86SG7 212 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 OR1S1Q8NH92 325 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 DTD1Q8TEA8 209 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 C20orf24Q9BUV8 137 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 RBKSQ9H477 322 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 PTTG2Q9NZH5 202 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 FLVCR2Q9UPI3 526 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 U3KQ87 197 aa9.85□□□□□ -0.83
LTBR-208ENST00000541005 SCGB2A1O75556 95 aa9.84□□□□□ -0.83
LTBR-208ENST00000541005 OR4E1P0C645 316 aa9.84□□□□□ -0.83
LTBR-208ENST00000541005 CD81P60033 236 aa9.84□□□□□ -0.83
LTBR-208ENST00000541005 GUCA2BQ16661 112 aa9.84□□□□□ -0.83
LTBR-208ENST00000541005 ETFRF1Q6IPR1 90 aa9.84□□□□□ -0.83
LTBR-208ENST00000541005 ZNF600Q6ZNG1 722 aa9.84□□□□□ -0.83
LTBR-208ENST00000541005 SBSPONQ8IVN8 264 aa9.84□□□□□ -0.83
LTBR-208ENST00000541005 TMEM116Q8NCL8 245 aa9.84□□□□□ -0.83
LTBR-208ENST00000541005 NEURL2Q9BR09 285 aa9.84□□□□□ -0.83
LTBR-208ENST00000541005 ZFAND3Q9H8U3 227 aa9.84□□□□□ -0.83
LTBR-208ENST00000541005 IGHV3OR16-8A0A075B7F1 116 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 TRAV30A0A087WSZ9 112 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 IGHV7-4-1A0A0J9YVY3 117 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 TSPAN4O14817 238 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 IGKV1-17P01599 117 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 ANXA7P20073 488 aaKnown RBP9.83□□□□□ -0.84
LTBR-208ENST00000541005 GGNBP1Q5YKI7 109 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 PRSS54Q6PEW0 395 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 TOMM20LQ6UXN7 152 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 COQ8AQ8NI60 647 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 SPAG8Q99932 426 aaPredicted RBP9.83□□□□□ -0.84
LTBR-208ENST00000541005 GINS3Q9BRX5 216 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 C20orf85Q9H1P6 137 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 SMPXQ9UHP9 88 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 U3KQK5 164 aa9.83□□□□□ -0.84
LTBR-208ENST00000541005 CHEK1O14757 476 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 ZNF207O43670 478 aaKnown RBP9.82□□□□□ -0.84
LTBR-208ENST00000541005 MED6O75586 246 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 YIF1AO95070 293 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 SCAF4O95104 1147 aaKnown RBP9.82□□□□□ -0.84
LTBR-208ENST00000541005 IFNA10P01566 189 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 HOXB5P09067 269 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 CD7P09564 240 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 IGLC1P0CG04 106 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 MLANAQ16655 118 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 C4orf46Q504U0 113 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 RBPMS2Q6ZRY4 209 aaKnown RBP9.82□□□□□ -0.84
LTBR-208ENST00000541005 SLC16A13Q7RTY0 426 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 OR1S2Q8NGQ3 325 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 ASCL2Q99929 193 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 TM2D3Q9BRN9 247 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 WDR12Q9GZL7 423 aaKnown RBP9.82□□□□□ -0.84
LTBR-208ENST00000541005 BATF3Q9NR55 127 aa9.82□□□□□ -0.84
LTBR-208ENST00000541005 PUS1Q9Y606 427 aaKnown RBP eCLIP9.82□□□□□ -0.84
LTBR-208ENST00000541005 TRAV14DV4A0A0A6YYC5 116 aa9.81□□□□□ -0.84
LTBR-208ENST00000541005 TCRBP04435 133 aa9.81□□□□□ -0.84
LTBR-208ENST00000541005 BMI1P35226 326 aa9.81□□□□□ -0.84
LTBR-208ENST00000541005 RND2P52198 227 aa9.81□□□□□ -0.84
LTBR-208ENST00000541005 ASAH1Q13510 395 aa9.81□□□□□ -0.84
LTBR-208ENST00000541005 LAMTOR1Q6IAA8 161 aa9.81□□□□□ -0.84
LTBR-208ENST00000541005 LINC00322Q6ZN03 302 aaPredicted RBP9.81□□□□□ -0.84
LTBR-208ENST00000541005 OR52B4Q8NGK2 314 aa9.81□□□□□ -0.84
LTBR-208ENST00000541005 MITD1Q8WV92 249 aa9.81□□□□□ -0.84
LTBR-208ENST00000541005 CIB3Q96Q77 187 aaPredicted RBP9.81□□□□□ -0.84
LTBR-208ENST00000541005 RHPN1-AS1Q9BWJ2 59 aa9.81□□□□□ -0.84
LTBR-208ENST00000541005 VSIRQ9H7M9 311 aa9.81□□□□□ -0.84
LTBR-208ENST00000541005 TBC1D24Q9ULP9 559 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms