RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 CTXND1A0A1B0GTU2 59 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 A0A1W2PPV4 95 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 SMCO3A2RU48 225 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 PMS2P5A8MQ11 134 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 F8W036 122 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 FCN3O75636 299 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 CD5P06127 495 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 RPL27AP46776 148 aaKnown RBP6.66□□□□□ -1.34
CHD4-208ENST00000540960 RPL29P47914 159 aaKnown RBP6.66□□□□□ -1.34
CHD4-208ENST00000540960 REG1BP48304 166 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 SELENOTP62341 195 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 AKR1C1Q04828 323 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 HNF4GQ14541 408 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 PSG5Q15238 335 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 GUK1Q16774 197 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 BSXQ3C1V8 233 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 KHDC3LQ587J8 217 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 KLF17Q5JT82 389 aaPredicted RBP6.66□□□□□ -1.34
CHD4-208ENST00000540960 TMEM144Q7Z5S9 345 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 PPP1R27Q86WC6 154 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 ZNF114Q8NC26 417 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 BPIFCQ8NFQ6 507 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 OR10G4Q8NGN3 311 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 BSCL2Q96G97 398 aaPredicted RBP6.66□□□□□ -1.34
CHD4-208ENST00000540960 P2RX4Q99571 388 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 NPCDR1Q9BY65 106 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 SLC35B3Q9H1N7 401 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 SH3BGRL3Q9H299 93 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 MANBALQ9NQG1 85 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 CARHSP1Q9Y2V2 147 aaKnown RBP6.66□□□□□ -1.34
CHD4-208ENST00000540960 RNF114Q9Y508 228 aa6.66□□□□□ -1.34
CHD4-208ENST00000540960 MDFIC2A0A1B0GVS7 189 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 RBFOX3A6NFN3 312 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 RRHO14718 337 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 NBR2O15453 112 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 SLC25A17O43808 307 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 CA2P00918 260 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 HSPB1P04792 205 aaKnown RBP6.65□□□□□ -1.34
CHD4-208ENST00000540960 PSMB3P49720 205 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 PROK1P58294 105 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 LINC00205P59089 165 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 PAX2Q02962 417 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 ARL16Q0P5N6 197 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 FFAR4Q5NUL3 377 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 VMO1Q7Z5L0 202 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 HAPLN4Q86UW8 402 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 Q8N7P7 452 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 NPBQ8NG41 125 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 OR10G9Q8NGN4 311 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 OR10G7Q8NGN6 311 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 OR1P1Q8NH06 330 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 PCNPQ8WW12 178 aaKnown RBP6.65□□□□□ -1.34
CHD4-208ENST00000540960 TMEM68Q96MH6 324 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 SIRPDQ9H106 197 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 ZNF430Q9H8G1 570 aaPredicted RBP6.65□□□□□ -1.34
CHD4-208ENST00000540960 TNFRSF19Q9NS68 423 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 METTL1Q9UBP6 276 aaKnown RBP6.65□□□□□ -1.34
CHD4-208ENST00000540960 PRELID1Q9Y255 219 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 SIGLEC9Q9Y336 463 aa6.65□□□□□ -1.34
CHD4-208ENST00000540960 KIAA1109Q2LD37 5005 aa6.65□□□□□ -1.35
CHD4-208ENST00000540960 TRAV3A0A0B4J244 114 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 A0A1W2PPI3 338 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 WI2-2373I1.2A0A1W2PRP0 233 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 MAP1LC3B2A6NCE7 125 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 SRRM4A7MD48 611 aaKnown RBP6.64□□□□□ -1.35
CHD4-208ENST00000540960 SEC14L6B5MCN3 397 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 J3QLI3 93 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 CNIH1O95406 144 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 IGLV2-23P01705 113 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 APOC3P02656 99 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 CRYGBP07316 175 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 FBP1P09467 338 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 OR13C7P0DN81 318 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 TAS2R45P59539 299 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 RHOBP62745 196 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 EBI3Q14213 229 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 FAM74A3Q4VXF1 159 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 SOHLH1Q5JUK2 328 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 ZNF506Q5JVG8 444 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 C10orf91Q5T1B1 145 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 LINC01006Q8NI28 216 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 MUC7Q8TAX7 377 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 PFDN5Q99471 154 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 MAP1LC3BQ9GZQ8 125 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 RPRMQ9NS64 109 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 THYN1Q9P016 225 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 VAX2Q9UIW0 290 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 U3KQK5 164 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 KIAA2026Q5HYC2 2103 aa6.64□□□□□ -1.35
CHD4-208ENST00000540960 M0QZK8 103 aa6.63□□□□□ -1.35
CHD4-208ENST00000540960 NDUFA3O95167 84 aa6.63□□□□□ -1.35
CHD4-208ENST00000540960 NDUFA7O95182 113 aa6.63□□□□□ -1.35
CHD4-208ENST00000540960 RNASE2P10153 161 aaKnown RBP6.63□□□□□ -1.35
CHD4-208ENST00000540960 LCN2P80188 198 aa6.63□□□□□ -1.35
CHD4-208ENST00000540960 RUNX1Q01196 453 aa6.63□□□□□ -1.35
CHD4-208ENST00000540960 DEFA5Q01523 94 aa6.63□□□□□ -1.35
CHD4-208ENST00000540960 PAX8Q06710 450 aa6.63□□□□□ -1.35
CHD4-208ENST00000540960 HES1Q14469 280 aa6.63□□□□□ -1.35
CHD4-208ENST00000540960 MMDQ15546 238 aa6.63□□□□□ -1.35
CHD4-208ENST00000540960 TNXAQ16473 311 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms