RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 SH3BGRL3Q9H299 93 aa8.3□□□□□ -1.08
ATL3-204ENST00000540699 WDR83OSQ9Y284 106 aa8.3□□□□□ -1.08
ATL3-204ENST00000540699 NOTCH1P46531 2555 aa8.3□□□□□ -1.08
ATL3-204ENST00000540699 UBE2L5PA0A1B0GUS4 154 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 AP4M1O00189 453 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 IFNA4P05014 189 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 CTRB1P17538 263 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 SNCAP37840 140 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 CRIP2P52943 208 aaPredicted RBP8.29□□□□□ -1.08
ATL3-204ENST00000540699 MFAP2P55001 183 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 RUNX1Q01196 453 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 ARSJQ5FYB0 599 aaPredicted RBP8.29□□□□□ -1.08
ATL3-204ENST00000540699 C9orf152Q5JTZ5 239 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 ASPHD1Q5U4P2 390 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 CTRB2Q6GPI1 263 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 CENPVQ7Z7K6 275 aaPredicted RBP8.29□□□□□ -1.08
ATL3-204ENST00000540699 RNASEH2CQ8TDP1 164 aaKnown RBP8.29□□□□□ -1.08
ATL3-204ENST00000540699 PCNPQ8WW12 178 aaKnown RBP8.29□□□□□ -1.08
ATL3-204ENST00000540699 ARPC1AQ92747 370 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 GNPNAT1Q96EK6 184 aaPredicted RBP8.29□□□□□ -1.08
ATL3-204ENST00000540699 PSMG3Q9BT73 122 aaPredicted RBP8.29□□□□□ -1.08
ATL3-204ENST00000540699 FBXO7Q9Y3I1 522 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 DMRT1Q9Y5R6 373 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 F11RQ9Y624 299 aaKnown RBP8.29□□□□□ -1.08
ATL3-204ENST00000540699 RFNGQ9Y644 331 aa8.29□□□□□ -1.08
ATL3-204ENST00000540699 LINC00862A6NCI5 91 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 CNIH1O95406 144 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 REG1AP05451 166 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 CRYGCP07315 174 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 EGR2P11161 476 aaPredicted RBP8.28□□□□□ -1.08
ATL3-204ENST00000540699 SUB1P53999 127 aaKnown RBP eCLIP8.28□□□□□ -1.08
ATL3-204ENST00000540699 CFHR3Q02985 330 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 CD69Q07108 199 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 NDUFA5Q16718 116 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 C19orf54Q5BKX5 351 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 TREML4Q6UXN2 200 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 C19orf35Q6ZS72 473 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 OR2G3Q8NGZ4 309 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 OR1P1Q8NH06 330 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 LRRC20Q8TCA0 184 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 RNF141Q8WVD5 230 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 RSG1Q9BU20 258 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 LSM4Q9Y4Z0 139 aaKnown RBP8.28□□□□□ -1.08
ATL3-204ENST00000540699 TIMM9Q9Y5J7 89 aa8.28□□□□□ -1.08
ATL3-204ENST00000540699 NPIPB5A8MRT5 1133 aa8.27□□□□□ -1.09
ATL3-204ENST00000540699 ATP6V0E1O15342 81 aa8.27□□□□□ -1.09
ATL3-204ENST00000540699 FGF7P21781 194 aa8.27□□□□□ -1.09
ATL3-204ENST00000540699 GPX4P36969 197 aaPredicted RBP8.27□□□□□ -1.09
ATL3-204ENST00000540699 RAB14P61106 215 aa8.27□□□□□ -1.09
ATL3-204ENST00000540699 KLK9Q2XQG4 91 aa8.27□□□□□ -1.09
ATL3-204ENST00000540699 SLC25A24Q6NUK1 477 aa8.27□□□□□ -1.09
ATL3-204ENST00000540699 SCGB1C1Q8TD33 95 aa8.27□□□□□ -1.09
ATL3-204ENST00000540699 ABHD5Q8WTS1 349 aa8.27□□□□□ -1.09
ATL3-204ENST00000540699 CACNG8Q8WXS5 425 aa8.27□□□□□ -1.09
ATL3-204ENST00000540699 NOL4LQ96MY1 436 aaPredicted RBP8.27□□□□□ -1.09
ATL3-204ENST00000540699 FAM103A1Q9BTL3 118 aaKnown RBP8.27□□□□□ -1.09
ATL3-204ENST00000540699 NPCDR1Q9BY65 106 aa8.27□□□□□ -1.09
ATL3-204ENST00000540699 FNDC4Q9H6D8 234 aaPredicted RBP8.27□□□□□ -1.09
ATL3-204ENST00000540699 MED9Q9NWA0 146 aa8.27□□□□□ -1.09
ATL3-204ENST00000540699 KLK9Q9UKQ9 250 aa8.27□□□□□ -1.09
ATL3-204ENST00000540699 PSMB11A5LHX3 300 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 MPDU1O75352 247 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 APELAP0DMC3 54 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 PPIFP30405 207 aaKnown RBP8.26□□□□□ -1.09
ATL3-204ENST00000540699 RAB5CP51148 216 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 GAMTQ14353 236 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 MLANAQ16655 118 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 TCTEX1D4Q5JR98 221 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 BTNL8Q6UX41 500 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 TMEM182Q6ZP80 229 aaPredicted RBP8.26□□□□□ -1.09
ATL3-204ENST00000540699 SLC16A13Q7RTY0 426 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 TMEM144Q7Z5S9 345 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 TTC9CQ8N5M4 171 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 RNF152Q8N8N0 203 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 OR5AU1Q8NGC0 362 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 SAT2Q96F10 170 aaPredicted RBP8.26□□□□□ -1.09
ATL3-204ENST00000540699 CXorf58Q96LI9 332 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 NPVFQ9HCQ7 196 aa8.26□□□□□ -1.09
ATL3-204ENST00000540699 IGKV1OR2-108A0A075B7D4 117 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 UMAD1C9J7I0 102 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 CORTO00230 105 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 IGHG4P01861 327 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 CD28P10747 220 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 SERF2P84101 59 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 DEFA6Q01524 100 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 ACSM6Q6P461 480 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 C10orf99Q6UWK7 81 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 SLC7A5P1Q8MH63 180 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 COMMD1Q8N668 190 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 OR1L6Q8NGR2 347 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 LYPD6BQ8NI32 183 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 FANCD2OSQ96PS1 177 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 MGST2Q99735 147 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 GGTLC1Q9BX51 225 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 PARP11Q9NR21 331 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 MRPL36Q9P0J6 103 aaKnown RBP8.25□□□□□ -1.09
ATL3-204ENST00000540699 LINC00527Q9UJ94 153 aa8.25□□□□□ -1.09
ATL3-204ENST00000540699 IGLV11-55A0A075B6I3 123 aa8.24□□□□□ -1.09
ATL3-204ENST00000540699 TRAV41A0A0B4J266 112 aa8.24□□□□□ -1.09
ATL3-204ENST00000540699 SMCO3A2RU48 225 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms