RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 JPT1Q9UK76 154 aa1.65□□□□□ -2.15
SRGAP1-203ENST00000537585 ZNF443Q9Y2A4 671 aaPredicted RBP1.65□□□□□ -2.15
SRGAP1-203ENST00000537585 TIMM9Q9Y5J7 89 aa1.65□□□□□ -2.15
SRGAP1-203ENST00000537585 BAZ2AQ9UIF9 1905 aaKnown RBP1.65□□□□□ -2.15
SRGAP1-203ENST00000537585 YTHDC2Q9H6S0 1430 aaKnown RBP1.65□□□□□ -2.15
SRGAP1-203ENST00000537585 NUP214P35658 2090 aaPredicted RBP1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 A0A087X0T9 212 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 TRAV40A0A0B4J280 105 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 TMEM189A5PLL7 270 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 CCDC160A6NGH7 325 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 RPL36A-HNRNPH2H7BZ11 118 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 NDUFB2O95178 105 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 MT-ND6P03923 174 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 TRGC2P03986 189 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 LGALS3P17931 250 aaKnown RBP1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 RPS3P23396 243 aaKnown RBP eCLIP1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 HINT1P49773 126 aaPredicted RBP1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 RAB5CP51148 216 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 ARPP19P56211 112 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 RBM11P57052 281 aaKnown RBP1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 HIST1H4AP62805 103 aaKnown RBP1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 SUPT4H1P63272 117 aaKnown RBP1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 NEDD8Q15843 81 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 RRN3P1Q2M238 152 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 BRMS1LQ5PSV4 323 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 ZFAND6Q6FIF0 208 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 TOMM20LQ6UXN7 152 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 MIR17HGQ75NE6 70 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 SLC35E3Q7Z769 313 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 TMEM229BQ8NBD8 167 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 OR8J3Q8NGG0 315 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 OR4D11Q8NGI4 311 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 OR5A1Q8NGJ0 315 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 OR2T10Q8NGZ9 312 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 OR4K15Q8NH41 348 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 CARD19Q96LW7 228 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 SCGB3A1Q96QR1 104 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 HIST1H2BLQ99880 126 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 UPK3BQ9BT76 320 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 OR2H1Q9GZK4 316 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 AICDAQ9GZX7 198 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 TXNL4BQ9NX01 149 aaKnown RBP1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 RASL12Q9NYN1 266 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 CALML5Q9NZT1 146 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 NAT8BQ9UHF3 227 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 EPDR1Q9UM22 224 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 LAMTOR2Q9Y2Q5 125 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 HEY1Q9Y5J3 304 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 S4R3C0 116 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 SCN10AQ9Y5Y9 1956 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 NUP160Q12769 1436 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 SETD5Q9C0A6 1442 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 PCM1Q15154 2024 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 PLXNB3Q9ULL4 1909 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 CCDC171Q6TFL3 1326 aa1.64□□□□□ -2.15
SRGAP1-203ENST00000537585 PLA2R1Q13018 1463 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 TRAV3A0A0B4J244 114 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 A0A1B0GVG6 124 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 IRGMA1A4Y4 181 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 H7BYZ3 331 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 SYNGR2O43760 224 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 FAM107AO95990 144 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 NPYP01303 97 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 MT-ND4LP03901 98 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 GZMBP10144 247 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 CRYGAP11844 174 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 XCL1P47992 114 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 SRP9P49458 86 aaKnown RBP1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 POLR2HP52434 150 aaKnown RBP1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 FOXA1P55317 472 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 YPEL3P61236 119 aaPredicted RBP1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 RPS11P62280 158 aaKnown RBP eCLIP1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 UBE2BP63146 152 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 SLC38A11Q08AI6 406 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 MIAQ16674 131 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 LINC01554Q52M75 96 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 AGTRAPQ6RW13 159 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 SPINT4Q6UDR6 99 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 SOSTDC1Q6X4U4 206 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 Q6ZS52 159 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 OR8I2Q8N0Y5 310 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 LRRC18Q8N456 261 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 OR4C16Q8NGL9 310 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 KLF14Q8TD94 323 aaPredicted RBP1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 BRK1Q8WUW1 75 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 TMEM106AQ96A25 262 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 ISOC1Q96CN7 298 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 SLAMF6Q96DU3 332 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 ADAT3Q96EY9 351 aaPredicted RBP1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 SLC25A21Q9BQT8 299 aaPredicted RBP1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 TM2D3Q9BRN9 247 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 ADAT1Q9BUB4 502 aaKnown RBP1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 NPCDR1Q9BY65 106 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 YIPF3Q9GZM5 350 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 TMEM126AQ9H061 195 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 POPDC3Q9HBV1 291 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 OTORQ9NRC9 128 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 SPANXA1Q9NS26 97 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 MED31Q9Y3C7 131 aa1.63□□□□□ -2.15
SRGAP1-203ENST00000537585 NUBP2Q9Y5Y2 271 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms