RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 KIR2DS3K7RE56 304 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 RHODO00212 210 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 LTBRP36941 435 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 NDUFV3P56181 108 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 RPS21P63220 83 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 C10orf128Q5T292 105 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 MKXQ8IYA7 352 aa6.99□□□□□ -1.29
SRGAP1-202ENST00000537556 GGTLC3B5MD39 225 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 SCGB2A1O75556 95 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 NCR2O95944 276 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 IGHG4P01861 327 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 ZNF138P52744 262 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 TCTAP57738 103 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 RPL30P62888 115 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 SRSF1Q07955 248 aaKnown RBP eCLIP6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 ZNF816Q0VGE8 651 aaPredicted RBP6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 GAGE2BQ13066 116 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 GAGE2EQ4V326 116 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 FAM214BQ7L5A3 538 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 PCP2Q8IVA1 136 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 CEND1Q8N111 149 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 WDR31Q8NA23 367 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 OR9G1Q8NH87 305 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 PPDPFLQ8WWR9 84 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 TMEM126AQ9H061 195 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 GAGE2DQ9UEU5 116 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 C5orf49A4QMS7 147 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 CRYGSP22914 178 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 C3AR1Q16581 482 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 SPINK9Q5DT21 86 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 AMTNQ6UX39 209 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 C20orf204Q6ZNR8 217 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 MIR17HGQ75NE6 70 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 RPRMLQ8N4K4 120 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 OR8A1Q8NGG7 326 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 CHAC1Q9BUX1 264 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 DEC1Q9P2X7 70 aa6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 MRPS17Q9Y2R5 130 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 LSM4Q9Y4Z0 139 aaKnown RBP6.98□□□□□ -1.29
SRGAP1-202ENST00000537556 NPIPB6E9PJ23 425 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 FNDC10F2Z333 226 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 APOHP02749 345 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 LINC00271P0C7V0 271 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 YRDCQ86U90 279 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 MOGAT3Q86VF5 341 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 PRSS3P2Q8NHM4 247 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 PIFOQ8TCI5 191 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 SRSF8Q9BRL6 282 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 C12orf49Q9H741 205 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 RTTNQ86VV8 2226 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 CCDC179H3BU77 68 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 WISP2O76076 250 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 SLC25A5P05141 298 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 CSN3P07498 182 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 IFITM1P13164 125 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 PRTN3P24158 256 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 CTGFP29279 349 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 LINC00696Q6ZRV3 163 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 NABP1Q96AH0 204 aa6.97□□□□□ -1.29
SRGAP1-202ENST00000537556 KIR2DS5A0A0G2JLQ3 304 aa6.96□□□□□ -1.29
SRGAP1-202ENST00000537556 A0A0G2JNG1 304 aa6.96□□□□□ -1.29
SRGAP1-202ENST00000537556 FCN3O75636 299 aa6.96□□□□□ -1.29
SRGAP1-202ENST00000537556 ATP5IP56385 69 aaPredicted RBP6.96□□□□□ -1.29
SRGAP1-202ENST00000537556 PRSS12P56730 875 aa6.96□□□□□ -1.29
SRGAP1-202ENST00000537556 KIR2DS5Q14953 304 aa6.96□□□□□ -1.29
SRGAP1-202ENST00000537556 CT83Q5H943 113 aa6.96□□□□□ -1.29
SRGAP1-202ENST00000537556 PRR31Q5SQ13 230 aa6.96□□□□□ -1.29
SRGAP1-202ENST00000537556 TRAV25A0A0B4J276 109 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 ACTL6BO94805 426 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 CACNG7P62955 275 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 SRYQ05066 204 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 TAL2Q16559 108 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 RRN3P1Q2M238 152 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 NRGNQ92686 78 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 ZNF414Q96IQ9 312 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 AMMECR1Q9Y4X0 333 aaPredicted RBP6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 WIPF1O43516 503 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 CD24P25063 80 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 CST6Q15828 149 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 C12orf74Q32Q52 190 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 FAM27BQ5VT28 67 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 CFAP126Q5VTH2 177 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 RBPMS2Q6ZRY4 209 aaKnown RBP6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 CCL4L1Q8NHW4 92 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 GLMPQ8WWB7 406 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 GFRA4Q9GZZ7 299 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 PPDPFQ9H3Y8 114 aa6.96□□□□□ -1.3
SRGAP1-202ENST00000537556 A0A1W2PQU0 124 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 CCL16O15467 120 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 SNCGO76070 127 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 CYBAP13498 195 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 PPIFP30405 207 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 MPV17P39210 176 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 PRR20EP86478 221 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 PRR20CP86479 221 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 PRR20DP86480 221 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 PRR20BP86481 221 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 PRR20AP86496 221 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 FHL3Q13643 280 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 ANXA2RQ3ZCQ2 193 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms