RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 MFSD2BA6NFX1 497 aa13.56□□□□□ -0.24
TNFRSF1A-209ENST00000536717 SIX6O95475 246 aa13.56□□□□□ -0.24
TNFRSF1A-209ENST00000536717 CYCSP99999 105 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1A-209ENST00000536717 CLEC19AQ6UXS0 136 aa13.56□□□□□ -0.24
TNFRSF1A-209ENST00000536717 ADAMTSL5Q6ZMM2 481 aa13.56□□□□□ -0.24
TNFRSF1A-209ENST00000536717 Q8N1Y9 231 aa13.56□□□□□ -0.24
TNFRSF1A-209ENST00000536717 SLC24A4Q8NFF2 622 aa13.56□□□□□ -0.24
TNFRSF1A-209ENST00000536717 PEMTQ9UBM1 199 aa13.56□□□□□ -0.24
TNFRSF1A-209ENST00000536717 U3KQ87 197 aa13.56□□□□□ -0.24
TNFRSF1A-209ENST00000536717 GGCTO75223 188 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-209ENST00000536717 POLR2GP62487 172 aaKnown RBP eCLIP13.55□□□□□ -0.24
TNFRSF1A-209ENST00000536717 NOXA1Q86UR1 476 aa13.55□□□□□ -0.24
TNFRSF1A-209ENST00000536717 EEF1AKMT3Q96AZ1 226 aa13.55□□□□□ -0.24
TNFRSF1A-209ENST00000536717 TENM3Q9P273 2699 aa13.55□□□□□ -0.24
TNFRSF1A-209ENST00000536717 SSSCA1O60232 199 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 OR2C1O95371 312 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 IFNA10P01566 189 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 MBPP02686 304 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 RNASE2P10153 161 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 IAPPP10997 89 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 BSXQ3C1V8 233 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 NMES1Q9C002 83 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 IZUMO1RA6ND01 250 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 CORTO00230 105 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 FRMD6-AS1P0C7T7 363 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 EDN2P20800 178 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 NPY1RP25929 384 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 ARL3P36405 182 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 MFAP2P55001 183 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 ATP5IP56385 69 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 H2BFSP57053 126 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 RRAS2P62070 204 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 RPP30P78346 268 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 GPHB5Q86YW7 130 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 SBSPONQ8IVN8 264 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 MISP3Q96FF7 219 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 CXorf58Q96LI9 332 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 RAB40CQ96S21 281 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 U3KQK5 164 aa13.54□□□□□ -0.24
TNFRSF1A-209ENST00000536717 TRBV7-1A0A0A6YYK4 115 aa13.53□□□□□ -0.24
TNFRSF1A-209ENST00000536717 LGALS9O00182 355 aa13.53□□□□□ -0.24
TNFRSF1A-209ENST00000536717 S100A10P60903 97 aa13.53□□□□□ -0.24
TNFRSF1A-209ENST00000536717 FCN2Q15485 313 aa13.53□□□□□ -0.24
TNFRSF1A-209ENST00000536717 C2orf83Q53S99 150 aa13.53□□□□□ -0.24
TNFRSF1A-209ENST00000536717 ZNF502Q8TBZ5 544 aa13.53□□□□□ -0.24
TNFRSF1A-209ENST00000536717 LSM5Q9Y4Y9 91 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-209ENST00000536717 DNAH7Q8WXX0 4024 aa13.52□□□□□ -0.24
TNFRSF1A-209ENST00000536717 KMT2CQ8NEZ4 4911 aaKnown RBP13.52□□□□□ -0.24
TNFRSF1A-209ENST00000536717 K7EPK0 472 aa13.52□□□□□ -0.25
TNFRSF1A-209ENST00000536717 CLEC3BP05452 202 aa13.52□□□□□ -0.25
TNFRSF1A-209ENST00000536717 CXCL3P19876 107 aa13.52□□□□□ -0.25
TNFRSF1A-209ENST00000536717 IL15RAQ13261 267 aa13.52□□□□□ -0.25
TNFRSF1A-209ENST00000536717 LCN12Q6JVE5 192 aa13.52□□□□□ -0.25
TNFRSF1A-209ENST00000536717 PINX1Q96BK5 328 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-209ENST00000536717 WWC2-AS2Q96NR7 200 aa13.52□□□□□ -0.25
TNFRSF1A-209ENST00000536717 RCL1Q9Y2P8 373 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-209ENST00000536717 C2orf70A6NJV1 201 aa13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 L7N2F9 121 aa13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 IGHV4-30-4P0DP06 118 aa13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 PVALBP20472 110 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 RAB11AP62491 216 aa13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 VAMP2P63027 116 aa13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 RAB32Q13637 225 aa13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 SPANXN5Q5MJ07 72 aa13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 PVRIGQ6DKI7 326 aa13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 OR11H7Q8NGC8 314 aa13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 VN1R17PQ8TDU5 208 aa13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 SMIM8Q96KF7 97 aa13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 PSENENQ9NZ42 101 aa13.51□□□□□ -0.25
TNFRSF1A-209ENST00000536717 GPR183P32249 361 aa13.5□□□□□ -0.25
TNFRSF1A-209ENST00000536717 CD300EQ496F6 205 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-209ENST00000536717 OR2K2Q8NGT1 345 aa13.5□□□□□ -0.25
TNFRSF1A-209ENST00000536717 RNASEH2CQ8TDP1 164 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-209ENST00000536717 ZC4H2Q9NQZ6 224 aa13.5□□□□□ -0.25
TNFRSF1A-209ENST00000536717 PAIP2BQ9ULR5 123 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-209ENST00000536717 STRAPQ9Y3F4 350 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-209ENST00000536717 A8MZ25 164 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 H3BP45 60 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 MT-CO2P00403 227 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 RLN2P04090 185 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 IFNA4P05014 189 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 FOLR2P14207 255 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 OPRK1P41145 380 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 TAS2R30P59541 319 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 DEFB114Q30KQ6 69 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 LRRC37A5PQ49AS3 106 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 SCARB1Q8WTV0 552 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 PPP1R1CQ8WVI7 109 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 CACNG8Q8WXS5 425 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 C19orf73Q9NVV2 129 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 IGHV3-21A0A0B4J1V1 117 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 RPS10-NUDT3A0A1W2PQS6 291 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 TMEM213A2RRL7 107 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 C15orf62A8K5M9 175 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 A8MWP6 167 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 I3L2K1 104 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 K7EIM0 57 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 TSC22D2O75157 780 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 PET100P0DJ07 73 aa13.49□□□□□ -0.25
TNFRSF1A-209ENST00000536717 FAM106AQ4KMX7 169 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms