RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 DMBX1Q8NFW5 382 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 UPK3BQ9BT76 320 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 PLGRKTQ9HBL7 147 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 ELF5Q9UKW6 265 aaPredicted RBP5.69□□□□□ -1.5
CLIP1-206ENST00000535290 NSG2Q9Y328 171 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 TNFRSF18Q9Y5U5 241 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 HLA-DRB4X5D2U9 266 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 FAM90A26D6RGX4 464 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 DENRO43583 198 aaKnown RBP5.68□□□□□ -1.5
CLIP1-206ENST00000535290 HPRT1P00492 218 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 PLA2G1BP04054 148 aaKnown RBP5.68□□□□□ -1.5
CLIP1-206ENST00000535290 FCN2Q15485 313 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 RAB11BQ15907 218 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 ESRGQ1W209 222 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 DNAL1Q4LDG9 190 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 RNASE12Q5GAN4 147 aaKnown RBP5.68□□□□□ -1.5
CLIP1-206ENST00000535290 PINX1Q96BK5 328 aaKnown RBP5.68□□□□□ -1.5
CLIP1-206ENST00000535290 FAM3DQ96BQ1 224 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 TMEM80Q96HE8 168 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 METTL26Q96S19 204 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 CENPOQ9BU64 300 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 SLC35B3Q9H1N7 401 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 FNDC4Q9H6D8 234 aaPredicted RBP5.68□□□□□ -1.5
CLIP1-206ENST00000535290 CCL28Q9NRJ3 127 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 FAM30AQ9NZY2 134 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 GOLT1BQ9Y3E0 138 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 OR51B2Q9Y5P1 312 aa5.68□□□□□ -1.5
CLIP1-206ENST00000535290 TMEM272A0A1B0GTI8 110 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 LOC100130705A0A1B0GUX0 176 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 DBX1A6NMT0 343 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 TMEM50AO95807 157 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 OXTP01178 125 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 CTXN2P0C2S0 81 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 P0C879 139 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 HIST1H1DP16402 221 aaKnown RBP5.67□□□□□ -1.5
CLIP1-206ENST00000535290 CALRP27797 417 aaKnown RBP5.67□□□□□ -1.5
CLIP1-206ENST00000535290 TALDO1P37837 337 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 SNRPD3P62318 126 aaKnown RBP5.67□□□□□ -1.5
CLIP1-206ENST00000535290 LRP2P98164 4655 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 HSD17B12Q53GQ0 312 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 OR10R2Q8NGX6 335 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 SLC7A6OSQ96CW6 309 aaPredicted RBP5.67□□□□□ -1.5
CLIP1-206ENST00000535290 C7orf50Q9BRJ6 194 aaKnown RBP5.67□□□□□ -1.5
CLIP1-206ENST00000535290 TMEM70Q9BUB7 260 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 PLEKHA2Q9HB19 425 aa5.67□□□□□ -1.5
CLIP1-206ENST00000535290 AK6Q9Y3D8 172 aaKnown RBP5.67□□□□□ -1.5
CLIP1-206ENST00000535290 IRGMA1A4Y4 181 aa5.66□□□□□ -1.5
CLIP1-206ENST00000535290 LYRM9A8MSI8 78 aa5.66□□□□□ -1.5
CLIP1-206ENST00000535290 ATP5G1P05496 136 aa5.66□□□□□ -1.5
CLIP1-206ENST00000535290 NPBWR1P48145 328 aa5.66□□□□□ -1.5
CLIP1-206ENST00000535290 ATP5G3P48201 142 aa5.66□□□□□ -1.5
CLIP1-206ENST00000535290 GNGT1P63211 74 aa5.66□□□□□ -1.5
CLIP1-206ENST00000535290 KCTD21Q4G0X4 260 aa5.66□□□□□ -1.5
CLIP1-206ENST00000535290 SECTM1Q8WVN6 248 aa5.66□□□□□ -1.5
CLIP1-206ENST00000535290 GLMPQ8WWB7 406 aa5.66□□□□□ -1.5
CLIP1-206ENST00000535290 RAB22AQ9UL26 194 aa5.66□□□□□ -1.5
CLIP1-206ENST00000535290 MRPS16Q9Y3D3 137 aaKnown RBP5.66□□□□□ -1.5
CLIP1-206ENST00000535290 EFCAB10A6NFE3 127 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 MARCH11A6NNE9 402 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 ZNF705GA8MUZ8 300 aaPredicted RBP5.65□□□□□ -1.5
CLIP1-206ENST00000535290 ATP8B1O43520 1251 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 UCHL1P09936 223 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 DTYMKP23919 212 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 NKX2-1P43699 371 aaPredicted RBP5.65□□□□□ -1.5
CLIP1-206ENST00000535290 HOXA1P49639 335 aaPredicted RBP5.65□□□□□ -1.5
CLIP1-206ENST00000535290 ST3GAL4Q11206 333 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 CNIH2Q6PI25 160 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 C16orf54Q6UWD8 224 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 MS4A15Q8N5U1 240 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 OR4B1Q8NGF8 309 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 OR51H1Q8NH63 302 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 FCGR1BQ92637 280 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 TMEM56Q96MV1 263 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 MAGT1Q9H0U3 335 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 SEPSECSQ9HD40 501 aaKnown RBP5.65□□□□□ -1.5
CLIP1-206ENST00000535290 MED4Q9NPJ6 270 aa5.65□□□□□ -1.5
CLIP1-206ENST00000535290 MRPL36Q9P0J6 103 aaKnown RBP5.65□□□□□ -1.5
CLIP1-206ENST00000535290 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 TRAV26-1A0A087WT03 109 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 PLAC8L1A1L4L8 177 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 CBY3A6NI87 242 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 KRASP01116 189 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 PTHLHP12272 177 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 GADD45AP24522 165 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 EIF2B2P49770 351 aaKnown RBP5.64□□□□□ -1.51
CLIP1-206ENST00000535290 AP2S1P53680 142 aaPredicted RBP5.64□□□□□ -1.51
CLIP1-206ENST00000535290 WNT4P56705 351 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 ERVK-16P61578 105 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 PSG9Q00887 426 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 ZNF114Q8NC26 417 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 GNPNAT1Q96EK6 184 aaPredicted RBP5.64□□□□□ -1.51
CLIP1-206ENST00000535290 RNF125Q96EQ8 232 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 NARS2Q96I59 477 aaKnown RBP5.64□□□□□ -1.51
CLIP1-206ENST00000535290 SAV1Q9H4B6 383 aaPredicted RBP5.64□□□□□ -1.51
CLIP1-206ENST00000535290 NRN1Q9NPD7 142 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 COMMD9Q9P000 198 aa5.64□□□□□ -1.51
CLIP1-206ENST00000535290 A0A0J9YY99 117 aa5.63□□□□□ -1.51
CLIP1-206ENST00000535290 F6UB75 175 aa5.63□□□□□ -1.51
CLIP1-206ENST00000535290 M0QYG6 137 aa5.63□□□□□ -1.51
CLIP1-206ENST00000535290 EBAG9O00559 213 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms