RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 MYOD1P15172 320 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 OPRK1P41145 380 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 AKR1C1Q04828 323 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 VWC2Q2TAL6 325 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 ALKAL2Q6UX46 152 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 HSD17B11Q8NBQ5 300 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 ARV1Q9H2C2 271 aa8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 F11RQ9Y624 299 aaKnown RBP8.65□□□□□ -1.02
CCDC90B-218ENST00000533761 A6NDX4 124 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 PMS2P5A8MQ11 134 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 TEX22C9J3V5 150 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 FCN1O00602 326 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 MBP02144 154 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 HIST1H1BP16401 226 aaKnown RBP8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 SERF2P84101 59 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 MRGPRG-AS1Q2M3A8 158 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 ANKRD39Q53RE8 183 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 TEPPQ6URK8 271 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 C16orf54Q6UWD8 224 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 TMEM219Q86XT9 240 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 SGMS2Q8NHU3 365 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 PIFOQ8TCI5 191 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 TMED6Q8WW62 240 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 P2RX4Q99571 388 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 PSMG3Q9BT73 122 aaPredicted RBP8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 KRTAP9-8Q9BYQ0 159 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 WDR61Q9GZS3 305 aaKnown RBP8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 VPREB3Q9UKI3 123 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 TIMM9Q9Y5J7 89 aa8.65□□□□□ -1.03
CCDC90B-218ENST00000533761 JMJD1CQ15652 2540 aa8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 IGHV7-81A0A0B4J1V7 117 aa8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 DNAJC9-AS1A6NH13 148 aa8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 TRIM77I1YAP6 450 aa8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 FBXO24O75426 580 aa8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 PRH1P02810 166 aa8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 SPP1P10451 314 aa8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 FGF7P21781 194 aa8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 CD69Q07108 199 aa8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 AKIRIN2Q53H80 203 aa8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 TAF15Q92804 592 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 RBMXL1Q96E39 390 aaKnown RBP8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 PARP11Q9NR21 331 aa8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 TNFRSF19Q9NS68 423 aa8.64□□□□□ -1.03
CCDC90B-218ENST00000533761 TET2Q6N021 2002 aaPredicted RBP8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 CGB1A6NKQ9 187 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 E7EUB6 86 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 TEX46H3BTG2 121 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 CFDP00746 253 aaPredicted RBP8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 CRYGCP07315 174 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 AREGP15514 252 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 CTRB1P17538 263 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 ATP6V0CP27449 155 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 ARL16Q0P5N6 197 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 LY6EQ16553 131 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 AKR1C8PQ5T2L2 129 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 CTRB2Q6GPI1 263 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 DPPA3Q6W0C5 159 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 SLC16A13Q7RTY0 426 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 HAPLN4Q86UW8 402 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 TTC9CQ8N5M4 171 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 OR2G3Q8NGZ4 309 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 MISP3Q96FF7 219 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 DUX5Q96PT3 197 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 KRTAP9-3Q9BYQ3 159 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 NPFFR1Q9GZQ6 430 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 WFDC1Q9HC57 220 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 ESM1Q9NQ30 184 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 WDR83OSQ9Y284 106 aa8.63□□□□□ -1.03
CCDC90B-218ENST00000533761 PRSS46E5RG02 174 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 AP4M1O00189 453 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 REG1AP05451 166 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 FABP1P07148 127 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 RNASE1P07998 156 aaKnown RBP8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 RAB2AP61019 212 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 BLOC1S1P78537 153 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 C9orf152Q5JTZ5 239 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 CLLU1Q5K131 121 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 CFAP161Q6P656 301 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 BTNL8Q6UX41 500 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 TMEM144Q7Z5S9 345 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 SLC35E3Q7Z769 313 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 TMEM170AQ8WVE7 144 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 SAT2Q96F10 170 aaPredicted RBP8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 BSCL2Q96G97 398 aaPredicted RBP8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 NPCDR1Q9BY65 106 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 WNT10AQ9GZT5 417 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 NF1P21359 2839 aa8.62□□□□□ -1.03
CCDC90B-218ENST00000533761 ANK3Q12955 4377 aaKnown RBP8.61□□□□□ -1.03
CCDC90B-218ENST00000533761 A0A1B0GW64 132 aa8.61□□□□□ -1.03
CCDC90B-218ENST00000533761 ZNF705EA8MWA4 302 aaPredicted RBP8.61□□□□□ -1.03
CCDC90B-218ENST00000533761 IGF1P05019 195 aa8.61□□□□□ -1.03
CCDC90B-218ENST00000533761 APELAP0DMC3 54 aa8.61□□□□□ -1.03
CCDC90B-218ENST00000533761 SULT1A2P50226 295 aa8.61□□□□□ -1.03
CCDC90B-218ENST00000533761 RPL15P61313 204 aaKnown RBP8.61□□□□□ -1.03
CCDC90B-218ENST00000533761 SSBP2P81877 361 aaPredicted RBP8.61□□□□□ -1.03
CCDC90B-218ENST00000533761 PVRIGQ6DKI7 326 aa8.61□□□□□ -1.03
CCDC90B-218ENST00000533761 UNQ5815/PRO19632Q6UWF5 114 aa8.61□□□□□ -1.03
CCDC90B-218ENST00000533761 LFNGQ8NES3 379 aa8.61□□□□□ -1.03
CCDC90B-218ENST00000533761 FAM110DQ8TAY7 271 aaPredicted RBP8.61□□□□□ -1.03
CCDC90B-218ENST00000533761 FAM103A1Q9BTL3 118 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms