RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 ARPC5LQ9BPX5 153 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 TMEM147Q9BVK8 224 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 PARD6GQ9BYG4 376 aaPredicted RBP10.98□□□□□ -0.65
HIF3A-215ENST00000533145 ARL6Q9H0F7 186 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 WFDC1Q9HC57 220 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 NPVFQ9HCQ7 196 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 ZNF355PQ9NSJ1 428 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 FBXL17Q9UF56 701 aa10.98□□□□□ -0.65
HIF3A-215ENST00000533145 A0A0G2JLM5 398 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 CLPSL1A2RUU4 121 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 BCL2L11O43521 198 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 KIAA0141Q14154 515 aaPredicted RBP10.97□□□□□ -0.65
HIF3A-215ENST00000533145 GAMTQ14353 236 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 SLC16A13Q7RTY0 426 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 TMEM144Q7Z5S9 345 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 LILRB2Q8N423 598 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 KLHDC1Q8N7A1 406 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 OR4X1Q8NH49 305 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 SCARB1Q8WTV0 552 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 CXorf58Q96LI9 332 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 MS4A10Q96PG2 267 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 TXN2Q99757 166 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 ATP5SQ99766 215 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 KLK15Q9H2R5 256 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 CYTL1Q9NRR1 136 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 UQCC1Q9NVA1 299 aa10.97□□□□□ -0.65
HIF3A-215ENST00000533145 KANTRA0A1W2PQU2 76 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 JTBO76095 146 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 TRGV3P03979 118 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 PF4V1P10720 104 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 PROK1P58294 105 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 ZNF266Q14584 549 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 OPCMLQ14982 345 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 C15orf32Q32M92 178 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 C10orf99Q6UWK7 81 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 OR5AU1Q8NGC0 362 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 WFDC12Q8WWY7 111 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 SLC35E1Q96K37 410 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 SMIM3Q9BZL3 60 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 RNF114Q9Y508 228 aa10.96□□□□□ -0.65
HIF3A-215ENST00000533145 TRBV7-1A0A0A6YYK4 115 aa10.95□□□□□ -0.66
HIF3A-215ENST00000533145 MFAP4P55083 255 aa10.95□□□□□ -0.66
HIF3A-215ENST00000533145 TPPP2P59282 170 aa10.95□□□□□ -0.66
HIF3A-215ENST00000533145 SRSF2Q01130 221 aaKnown RBP10.95□□□□□ -0.66
HIF3A-215ENST00000533145 ATP5G2Q06055 141 aa10.95□□□□□ -0.66
HIF3A-215ENST00000533145 CLINT1Q14677 625 aa10.95□□□□□ -0.66
HIF3A-215ENST00000533145 TREML4Q6UXN2 200 aa10.95□□□□□ -0.66
HIF3A-215ENST00000533145 THAP8Q8NA92 274 aa10.95□□□□□ -0.66
HIF3A-215ENST00000533145 UBAC2Q8NBM4 344 aa10.95□□□□□ -0.66
HIF3A-215ENST00000533145 ZNF502Q8TBZ5 544 aa10.95□□□□□ -0.66
HIF3A-215ENST00000533145 ARV1Q9H2C2 271 aa10.95□□□□□ -0.66
HIF3A-215ENST00000533145 C21orf62Q9NYP8 219 aa10.95□□□□□ -0.66
HIF3A-215ENST00000533145 MRPL36Q9P0J6 103 aaKnown RBP10.95□□□□□ -0.66
HIF3A-215ENST00000533145 WDR83OSQ9Y284 106 aa10.95□□□□□ -0.66
HIF3A-215ENST00000533145 LSM4Q9Y4Z0 139 aaKnown RBP10.95□□□□□ -0.66
HIF3A-215ENST00000533145 BORCS7-ASMTA0A0B4J1R7 106 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 MFSD2BA6NFX1 497 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 MPDU1O75352 247 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 CLN5O75503 358 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 IFNA5P01569 189 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 NPBWR1P48145 328 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 FOXL1Q12952 345 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 FAM209BQ5JX69 171 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 RPL7L1Q6DKI1 246 aaKnown RBP10.94□□□□□ -0.66
HIF3A-215ENST00000533145 SLC51BQ86UW2 128 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 ZNF491Q8N8L2 437 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 NPIPB3Q92617 1050 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 EEF1AKMT3Q96AZ1 226 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 UBE2E2Q96LR5 201 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 MDFIQ99750 246 aa10.94□□□□□ -0.66
HIF3A-215ENST00000533145 WDR61Q9GZS3 305 aaKnown RBP10.94□□□□□ -0.66
HIF3A-215ENST00000533145 GAR1Q9NY12 217 aaKnown RBP10.94□□□□□ -0.66
HIF3A-215ENST00000533145 TRAV30A0A087WSZ9 112 aa10.93□□□□□ -0.66
HIF3A-215ENST00000533145 IGHV3-21A0A0B4J1V1 117 aa10.93□□□□□ -0.66
HIF3A-215ENST00000533145 F8W735 103 aaPredicted RBP10.93□□□□□ -0.66
HIF3A-215ENST00000533145 RPLP1P05386 114 aaKnown RBP10.93□□□□□ -0.66
HIF3A-215ENST00000533145 RND2P52198 227 aa10.93□□□□□ -0.66
HIF3A-215ENST00000533145 EIF5AP63241 154 aaKnown RBP10.93□□□□□ -0.66
HIF3A-215ENST00000533145 TCTEX1D4Q5JR98 221 aa10.93□□□□□ -0.66
HIF3A-215ENST00000533145 ZNF343Q6P1L6 599 aa10.93□□□□□ -0.66
HIF3A-215ENST00000533145 ACSM6Q6P461 480 aa10.93□□□□□ -0.66
HIF3A-215ENST00000533145 TEPPQ6URK8 271 aa10.93□□□□□ -0.66
HIF3A-215ENST00000533145 PRIMA1Q86XR5 153 aa10.93□□□□□ -0.66
HIF3A-215ENST00000533145 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.93□□□□□ -0.66
HIF3A-215ENST00000533145 OR4X2Q8NGF9 303 aa10.93□□□□□ -0.66
HIF3A-215ENST00000533145 STOML3Q8TAV4 291 aa10.93□□□□□ -0.66
HIF3A-215ENST00000533145 BOLA1Q9Y3E2 137 aa10.93□□□□□ -0.66
HIF3A-215ENST00000533145 IGKV1OR2-108A0A075B7D4 117 aa10.92□□□□□ -0.66
HIF3A-215ENST00000533145 IGHV3-48P01763 117 aa10.92□□□□□ -0.66
HIF3A-215ENST00000533145 CDX1P47902 265 aaPredicted RBP10.92□□□□□ -0.66
HIF3A-215ENST00000533145 AKR1C1Q04828 323 aa10.92□□□□□ -0.66
HIF3A-215ENST00000533145 SCGB1C1Q8TD33 95 aa10.92□□□□□ -0.66
HIF3A-215ENST00000533145 ACY3Q96HD9 319 aa10.92□□□□□ -0.66
HIF3A-215ENST00000533145 CCDC140Q96MF4 163 aa10.92□□□□□ -0.66
HIF3A-215ENST00000533145 TRGV9Q99603 122 aa10.92□□□□□ -0.66
HIF3A-215ENST00000533145 GINS3Q9BRX5 216 aa10.92□□□□□ -0.66
HIF3A-215ENST00000533145 ZNF471Q9BX82 626 aaPredicted RBP10.92□□□□□ -0.66
HIF3A-215ENST00000533145 IGKV1D-37A0A075B6S9 117 aa10.91□□□□□ -0.66
HIF3A-215ENST00000533145 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.91□□□□□ -0.66
HIF3A-215ENST00000533145 UBE2L5PA0A1B0GUS4 154 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms