RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ARSJQ5FYB0 599 aaPredicted RBP14.68□□□□□ -0.06
SMPD1-208ENST00000533123 RPS10P5Q9NQ39 176 aa14.68□□□□□ -0.06
SMPD1-208ENST00000533123 KIAA1456Q9P272 454 aa14.68□□□□□ -0.06
SMPD1-208ENST00000533123 SCAF4O95104 1147 aaKnown RBP14.67□□□□□ -0.06
SMPD1-208ENST00000533123 MT-ND4LP03901 98 aa14.67□□□□□ -0.06
SMPD1-208ENST00000533123 RNASE2P10153 161 aaKnown RBP14.67□□□□□ -0.06
SMPD1-208ENST00000533123 IER3P46695 156 aa14.67□□□□□ -0.06
SMPD1-208ENST00000533123 SERF2P84101 59 aa14.67□□□□□ -0.06
SMPD1-208ENST00000533123 BSXQ3C1V8 233 aa14.67□□□□□ -0.06
SMPD1-208ENST00000533123 SPSB3Q6PJ21 355 aa14.67□□□□□ -0.06
SMPD1-208ENST00000533123 TREML4Q6UXN2 200 aa14.67□□□□□ -0.06
SMPD1-208ENST00000533123 SSX7Q7RTT5 188 aa14.67□□□□□ -0.06
SMPD1-208ENST00000533123 CENPVQ7Z7K6 275 aaPredicted RBP14.67□□□□□ -0.06
SMPD1-208ENST00000533123 PPP1R27Q86WC6 154 aa14.67□□□□□ -0.06
SMPD1-208ENST00000533123 LURAP1LQ8IV03 231 aa14.67□□□□□ -0.06
SMPD1-208ENST00000533123 TNFRSF19Q9NS68 423 aa14.67□□□□□ -0.06
SMPD1-208ENST00000533123 TIMM9Q9Y5J7 89 aa14.67□□□□□ -0.06
SMPD1-208ENST00000533123 FCN1O00602 326 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 NDUFA3O95167 84 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 FABP1P07148 127 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 RAB2AP61019 212 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 GNB1P62873 340 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 DLK1P80370 383 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 ZNF726P1Q15940 193 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 TNXAQ16473 311 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 Q6YL49 198 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 SCRT1Q9BWW7 348 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 REG1AP05451 166 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 S100A6P06703 90 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 APELAP0DMC3 54 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 AWAT1Q58HT5 328 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 TMEM41BQ5BJD5 291 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 DPPA3Q6W0C5 159 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 GGACTQ9BVM4 153 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 GSN-AS1Q9NRJ2 163 aa14.66□□□□□ -0.06
SMPD1-208ENST00000533123 C7orf77A4D0Y5 90 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 C5orf64Q2M2E5 130 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 C2orf83Q53S99 150 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 MMD2Q8IY49 270 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 SIGLECL1Q8N7X8 197 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 RCC1LQ96I51 464 aaKnown RBP14.65□□□□□ -0.06
SMPD1-208ENST00000533123 RBM14Q96PK6 669 aaKnown RBP14.65□□□□□ -0.06
SMPD1-208ENST00000533123 SLC25A33Q9BSK2 321 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 TUBA4BQ9H853 241 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 A0A1W2PN81 502 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 S100A9P06702 114 aaKnown RBP14.65□□□□□ -0.06
SMPD1-208ENST00000533123 CHRNA7P36544 502 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 SSBP2P81877 361 aaPredicted RBP14.65□□□□□ -0.06
SMPD1-208ENST00000533123 ERHP84090 104 aaKnown RBP14.65□□□□□ -0.06
SMPD1-208ENST00000533123 FFAR4Q5NUL3 377 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 Q8N9W7 124 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 MGST2Q99735 147 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 PRDM13Q9H4Q3 707 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 C1RLQ9NZP8 487 aa14.65□□□□□ -0.06
SMPD1-208ENST00000533123 A6NDX4 124 aa14.64□□□□□ -0.07
SMPD1-208ENST00000533123 INAFM1C9JVW0 142 aa14.64□□□□□ -0.07
SMPD1-208ENST00000533123 HOXA3O43365 443 aaPredicted RBP14.64□□□□□ -0.07
SMPD1-208ENST00000533123 ACTL6BO94805 426 aa14.64□□□□□ -0.07
SMPD1-208ENST00000533123 OR13C7P0DN81 318 aa14.64□□□□□ -0.07
SMPD1-208ENST00000533123 MLANAQ16655 118 aa14.64□□□□□ -0.07
SMPD1-208ENST00000533123 ZNF709Q8N972 641 aa14.64□□□□□ -0.07
SMPD1-208ENST00000533123 ISOC2Q96AB3 205 aa14.64□□□□□ -0.07
SMPD1-208ENST00000533123 CDC42EP3Q9UKI2 254 aa14.64□□□□□ -0.07
SMPD1-208ENST00000533123 INS-IGF2F8WCM5 200 aa14.64□□□□□ -0.07
SMPD1-208ENST00000533123 DEFA4P12838 97 aa14.64□□□□□ -0.07
SMPD1-208ENST00000533123 COMPP49747 757 aaPredicted RBP14.64□□□□□ -0.07
SMPD1-208ENST00000533123 FABP9Q0Z7S8 132 aa14.64□□□□□ -0.07
SMPD1-208ENST00000533123 RPP25LQ8N5L8 163 aaKnown RBP14.64□□□□□ -0.07
SMPD1-208ENST00000533123 PITPNC1Q9UKF7 332 aa14.64□□□□□ -0.07
SMPD1-208ENST00000533123 FN1P02751 2386 aaKnown RBP14.63□□□□□ -0.07
SMPD1-208ENST00000533123 IGLC7A0M8Q6 106 aa14.63□□□□□ -0.07
SMPD1-208ENST00000533123 AREGP15514 252 aa14.63□□□□□ -0.07
SMPD1-208ENST00000533123 SRD5A1P18405 259 aa14.63□□□□□ -0.07
SMPD1-208ENST00000533123 RPL27AP46776 148 aaKnown RBP14.63□□□□□ -0.07
SMPD1-208ENST00000533123 GUK1Q16774 197 aa14.63□□□□□ -0.07
SMPD1-208ENST00000533123 LCN15Q6UWW0 184 aa14.63□□□□□ -0.07
SMPD1-208ENST00000533123 C19orf35Q6ZS72 473 aa14.63□□□□□ -0.07
SMPD1-208ENST00000533123 SSMEM1Q8WWF3 244 aa14.63□□□□□ -0.07
SMPD1-208ENST00000533123 SH2D7A6NKC9 451 aaPredicted RBP14.62□□□□□ -0.07
SMPD1-208ENST00000533123 FGF8P55075 233 aaPredicted RBP14.62□□□□□ -0.07
SMPD1-208ENST00000533123 COMMD1Q8N668 190 aa14.62□□□□□ -0.07
SMPD1-208ENST00000533123 DUX5Q96PT3 197 aa14.62□□□□□ -0.07
SMPD1-208ENST00000533123 GGTLC1Q9BX51 225 aa14.62□□□□□ -0.07
SMPD1-208ENST00000533123 NIT2Q9NQR4 276 aa14.62□□□□□ -0.07
SMPD1-208ENST00000533123 LSM4Q9Y4Z0 139 aaKnown RBP14.62□□□□□ -0.07
SMPD1-208ENST00000533123 C17orf112F2Z3M2 114 aa14.62□□□□□ -0.07
SMPD1-208ENST00000533123 OR5R1Q8NH85 324 aa14.62□□□□□ -0.07
SMPD1-208ENST00000533123 P2RX4Q99571 388 aa14.62□□□□□ -0.07
SMPD1-208ENST00000533123 RARRES2Q99969 163 aa14.62□□□□□ -0.07
SMPD1-208ENST00000533123 RASL11BQ9BPW5 248 aa14.62□□□□□ -0.07
SMPD1-208ENST00000533123 EIF5A2Q9GZV4 153 aaKnown RBP14.62□□□□□ -0.07
SMPD1-208ENST00000533123 NPVFQ9HCQ7 196 aa14.62□□□□□ -0.07
SMPD1-208ENST00000533123 MOB4Q9Y3A3 225 aa14.62□□□□□ -0.07
SMPD1-208ENST00000533123 BTBD17A6NE02 478 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 RAB5AP20339 215 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 NF1P21359 2839 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 GCSAMLQ5JQS6 135 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 C5orf56Q8N8D9 126 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 LFNGQ8NES3 379 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 C20orf24Q9BUV8 137 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms