RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 PAX2Q02962 417 aa13.13□□□□□ -0.31
PCDHA6-203ENST00000529310 ZDBF2Q9HCK1 2354 aa13.13□□□□□ -0.31
PCDHA6-203ENST00000529310 WBP1Q96G27 269 aa13.13□□□□□ -0.31
PCDHA6-203ENST00000529310 ID3Q02535 119 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 ORAOV1Q8WV07 137 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 SLC25A28Q96A46 364 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 NXT2Q9NPJ8 142 aaKnown RBP13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 HEPN1Q6WQI6 88 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 NEU4Q8WWR8 484 aaPredicted RBP13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 SLC50A1Q9BRV3 221 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 NPFFR1Q9GZQ6 430 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 TRAV12-3A0A0B4J271 114 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 HOXA3O43365 443 aaPredicted RBP13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 IGHV1-2P23083 117 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 BSPH1Q075Z2 132 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 PVRIGQ6DKI7 326 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 PYYP10082 97 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 GFI1BQ5VTD9 330 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 JMJD8Q96S16 334 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 HIST1H2BLQ99880 126 aa13.12□□□□□ -0.31
PCDHA6-203ENST00000529310 PPBPP02775 128 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 C1QL4Q86Z23 238 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 RNF125Q96EQ8 232 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 DEPPQ9NTK1 212 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 TRGV2A0A075B6R0 118 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 IGKV1-9A0A0C4DH69 117 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 A0A0G2JMM0 328 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 A0A1W2PPB8 328 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 A0A1W2PRS3 328 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 TCRBV4S1A1TA0A5B7 111 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 KIR3DP1A8MWS1 328 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 NBR2O15453 112 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 RAMP3O60896 148 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 CD7P09564 240 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 WFDC1Q9HC57 220 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 PSG8Q9UQ74 426 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 IGKV3D-20A0A0C4DH25 116 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 GHRHP01286 108 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 CELA3BP08861 270 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 TEX38Q6PEX7 206 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 ZIC4Q8N9L1 334 aa13.11□□□□□ -0.31
PCDHA6-203ENST00000529310 CCL3L1P16619 93 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 MPZP25189 248 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 FAM89BQ8N5H3 189 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 SPAG8Q99932 426 aaPredicted RBP13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 CYSLTR1Q9Y271 337 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 TET1Q8NFU7 2136 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 IGHV3-11P01762 117 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 MORN2Q502X0 79 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 ZNF497Q6ZNH5 498 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 RNF182Q8N6D2 247 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 CHCHD1Q96BP2 118 aaKnown RBP13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 C17orf100A8MU93 164 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 EFNB3Q15768 340 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 LDLRAD2Q5SZI1 272 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 GTF3AQ92664 365 aaKnown RBP13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 SIGMAR1Q99720 223 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 CACNA1IQ9P0X4 2223 aa13.1□□□□□ -0.31
PCDHA6-203ENST00000529310 ORMDL2Q53FV1 153 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 OR2K2Q8NGT1 345 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 LYZL4Q96KX0 146 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 ANAPC13Q9BS18 74 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 CCL1P22362 96 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 KIR3DL3Q8N743 410 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 YAE1D1Q9NRH1 226 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 IGKCP01834 107 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 TSKUQ8WUA8 353 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 TMEM242Q9NWH2 141 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 A0A087WV48 116 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 UMODP07911 640 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 C11orf68Q9H3H3 251 aaKnown RBP13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 SLC25A15Q9Y619 301 aa13.09□□□□□ -0.31
PCDHA6-203ENST00000529310 TRAV2A0A0B4J234 112 aa13.08□□□□□ -0.31
PCDHA6-203ENST00000529310 SLC25A20O43772 301 aa13.08□□□□□ -0.31
PCDHA6-203ENST00000529310 SLC25A2Q9BXI2 301 aa13.08□□□□□ -0.31
PCDHA6-203ENST00000529310 WDR83OSQ9Y284 106 aa13.08□□□□□ -0.31
PCDHA6-203ENST00000529310 CHTOPQ9Y3Y2 248 aaKnown RBP13.08□□□□□ -0.31
PCDHA6-203ENST00000529310 HIST3H2BBQ8N257 126 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 GLMPQ8WWB7 406 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 MRPS18CQ9Y3D5 142 aaKnown RBP13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 TRBV24-1A0A075B6N3 115 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 TRAV21A0A0B4J279 112 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 ZNF815PA8K554 130 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 CD5P06127 495 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 RIPPLY3P57055 190 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 PAQR4Q8N4S7 273 aaPredicted RBP13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 ZNF479Q96JC4 524 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 SEC11AP67812 179 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 PLNP26678 52 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 PRCDQ00LT1 54 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 TMEM42Q69YG0 159 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 IFI27L1Q96BM0 104 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 IMMP1LQ96LU5 166 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 VSIRQ9H7M9 311 aa13.08□□□□□ -0.32
PCDHA6-203ENST00000529310 HSD52Q0P140 79 aa13.07□□□□□ -0.32
PCDHA6-203ENST00000529310 ABHD17AQ96GS6 310 aa13.07□□□□□ -0.32
PCDHA6-203ENST00000529310 TRAV8-4A0A0B4J246 113 aa13.07□□□□□ -0.32
PCDHA6-203ENST00000529310 A8MWV9 139 aa13.07□□□□□ -0.32
PCDHA6-203ENST00000529310 PRR32B1ATL7 298 aa13.07□□□□□ -0.32
PCDHA6-203ENST00000529310 OR9G9P0C7N8 305 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms