RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 OR2J3O76001 311 aa9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 NDUFB8O95169 186 aa9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 TRGV3P03979 118 aa9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 RAB9AP51151 201 aa9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 CAV2P51636 162 aa9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 SUB1P53999 127 aaKnown RBP eCLIP9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 KRTAP10-3P60369 221 aa9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 RHOGP84095 191 aa9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 FOXE3Q13461 319 aa9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 AWAT1Q58HT5 328 aa9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 HIST2H2BDQ6DRA6 164 aa9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 TMEM14EPQ6UXP3 125 aa9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 RNF152Q8N8N0 203 aa9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 PCNPQ8WW12 178 aaKnown RBP9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 LYRM2Q9NU23 88 aaPredicted RBP9.46□□□□□ -0.89
TRAF3IP2-211ENST00000528599 IGSF23A1L1A6 192 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 NUDT19A8MXV4 375 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 RPLP1P05386 114 aaKnown RBP9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 ELANEP08246 267 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 HIST1H1BP16401 226 aaKnown RBP9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 ATP5IP56385 69 aaPredicted RBP9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 TPPP2P59282 170 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 KIAA0141Q14154 515 aaPredicted RBP9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 MLANAQ16655 118 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 COMMD1Q8N668 190 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 OR1L6Q8NGR2 347 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 SAT2Q96F10 170 aaPredicted RBP9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 MISP3Q96FF7 219 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 CXorf58Q96LI9 332 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 ZC4H2Q9NQZ6 224 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 FBXL7Q9UJT9 491 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 IGHV3-21A0A0B4J1V1 117 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 PMS2P5A8MQ11 134 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 KRBOX1C9JBD0 128 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 K7EIM0 57 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 IFNA4P05014 189 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 OR8U8P0C7N1 319 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 METTL15P1P0C7V9 234 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 CD28P10747 220 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 RPP30P78346 268 aaKnown RBP9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 TOR2AQ5JU69 321 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 RPL7L1Q6DKI1 246 aaKnown RBP9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 ETV3LQ6ZN32 361 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 HAPLN4Q86UW8 402 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 TMEM252Q8N6L7 170 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 C11orf44Q8N8P7 122 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 NECAP1Q8NC96 275 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 MYOZ3Q8TDC0 251 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 PINX1Q96BK5 328 aaKnown RBP9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 SLC25A31Q9H0C2 315 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 FNDC4Q9H6D8 234 aaPredicted RBP9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 FBXL17Q9UF56 701 aa9.45□□□□□ -0.9
TRAF3IP2-211ENST00000528599 BORCS7-ASMTA0A0B4J1R7 106 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 PRSS46E5RG02 174 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 I3L2K1 104 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 I3L521 148 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 CYB5BO43169 146 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 MT-CO2P00403 227 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 IGHV3-48P01763 117 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 RAB11AP62491 216 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 ARL16Q0P5N6 197 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 FAM74A1Q5RGS3 127 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 OR4X2Q8NGF9 303 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 RNASEH2CQ8TDP1 164 aaKnown RBP9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 S4R3C0 116 aa9.44□□□□□ -0.9
TRAF3IP2-211ENST00000528599 RAB19A4D1S5 217 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 FAM223BA6NKX1 122 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 CST7O76096 145 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 SEC11BP0C7V7 166 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 BAXQ07812 192 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 C15orf32Q32M92 178 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 OR8G2PQ6IF36 304 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 UQCC3Q6UW78 93 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 FAM223AQ8IWN6 122 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 ZNF491Q8N8L2 437 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 BSCL2Q96G97 398 aaPredicted RBP9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 GINS3Q9BRX5 216 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 THYN1Q9P016 225 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 MRPL36Q9P0J6 103 aaKnown RBP9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 FBN3Q75N90 2809 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 VWFP04275 2813 aa9.43□□□□□ -0.9
TRAF3IP2-211ENST00000528599 CORTO00230 105 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 OPRK1P41145 380 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 SULT1A1P50225 295 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 SULT1A2P50226 295 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 EWSR1Q01844 656 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 NHLH2Q02577 135 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 ATP5G2Q06055 141 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 TMED6Q8WW62 240 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 MARC2Q969Z3 335 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 USMG5Q96IX5 58 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 CITED2Q99967 270 aaPredicted RBP9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 GNB4Q9HAV0 340 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 PKD1L1Q8TDX9 2849 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 TCRBV4S1A1TA0A5B7 111 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 IGHV3-11P01762 117 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 IGHV3-23P01764 117 aa9.42□□□□□ -0.9
TRAF3IP2-211ENST00000528599 ZP3P21754 424 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms