RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 DAZ1Q9NQZ3 744 aaKnown RBP12.69□□□□□ -0.38
HIF3A-211ENST00000528563 STAB2Q8WWQ8 2551 aa12.68□□□□□ -0.38
HIF3A-211ENST00000528563 GNG7O60262 68 aa12.68□□□□□ -0.38
HIF3A-211ENST00000528563 TMEM50AO95807 157 aa12.68□□□□□ -0.38
HIF3A-211ENST00000528563 RELQ04864 619 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-211ENST00000528563 CCDC32Q9BV29 185 aa12.68□□□□□ -0.38
HIF3A-211ENST00000528563 RBKSQ9H477 322 aa12.68□□□□□ -0.38
HIF3A-211ENST00000528563 MRPL36Q9P0J6 103 aaKnown RBP12.68□□□□□ -0.38
HIF3A-211ENST00000528563 TMED3Q9Y3Q3 217 aa12.68□□□□□ -0.38
HIF3A-211ENST00000528563 IGHV3OR16-8A0A075B7F1 116 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 C15orf62A8K5M9 175 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 A8MZ25 164 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 LYRM1O43325 122 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 NHLRC4P0CG21 123 aaPredicted RBP12.67□□□□□ -0.38
HIF3A-211ENST00000528563 C11orf87Q6NUJ2 197 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 TMEM61Q8N0U2 210 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 SLC24A4Q8NFF2 622 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 OR1S1Q8NH92 325 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 S100ZQ8WXG8 99 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 WDR89Q96FK6 387 aaPredicted RBP12.67□□□□□ -0.38
HIF3A-211ENST00000528563 OR10C1Q96KK4 312 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 C20orf24Q9BUV8 137 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 C19orf73Q9NVV2 129 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 SELENOKQ9Y6D0 94 aa12.67□□□□□ -0.38
HIF3A-211ENST00000528563 OR4E1P0C645 316 aa12.66□□□□□ -0.38
HIF3A-211ENST00000528563 FRMD6-AS1P0C7T7 363 aa12.66□□□□□ -0.38
HIF3A-211ENST00000528563 IGHV4-30-4P0DP06 118 aa12.66□□□□□ -0.38
HIF3A-211ENST00000528563 OPRK1P41145 380 aa12.66□□□□□ -0.38
HIF3A-211ENST00000528563 DHRS2Q13268 280 aa12.66□□□□□ -0.38
HIF3A-211ENST00000528563 BTNL8Q6UX41 500 aa12.66□□□□□ -0.38
HIF3A-211ENST00000528563 GTSCR1Q86UQ5 136 aa12.66□□□□□ -0.38
HIF3A-211ENST00000528563 OR4X1Q8NH49 305 aa12.66□□□□□ -0.38
HIF3A-211ENST00000528563 RNASEH2CQ8TDP1 164 aaKnown RBP12.66□□□□□ -0.38
HIF3A-211ENST00000528563 DTD1Q8TEA8 209 aa12.66□□□□□ -0.38
HIF3A-211ENST00000528563 U3KQ87 197 aa12.66□□□□□ -0.38
HIF3A-211ENST00000528563 TRAV25A0A0B4J276 109 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 CLN5O75503 358 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 HOXB5P09067 269 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 ANXA7P20073 488 aaKnown RBP12.65□□□□□ -0.38
HIF3A-211ENST00000528563 NPY1RP25929 384 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 GGNBP1Q5YKI7 109 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 LYG2Q86SG7 212 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 NOXA1Q86UR1 476 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 ASCL2Q99929 193 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 BATF3Q9NR55 127 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 PTTG2Q9NZH5 202 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 FAM90A26D6RGX4 464 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 ZNF207O43670 478 aaKnown RBP12.65□□□□□ -0.38
HIF3A-211ENST00000528563 ATP5IP56385 69 aaPredicted RBP12.65□□□□□ -0.38
HIF3A-211ENST00000528563 GUCA2BQ16661 112 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 PRSS54Q6PEW0 395 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 TOMM20LQ6UXN7 152 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 SBSPONQ8IVN8 264 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 SMPXQ9UHP9 88 aa12.65□□□□□ -0.38
HIF3A-211ENST00000528563 TENM3Q9P273 2699 aa12.64□□□□□ -0.39
HIF3A-211ENST00000528563 RPS10-NUDT3A0A1W2PQS6 291 aa12.64□□□□□ -0.39
HIF3A-211ENST00000528563 YIF1AO95070 293 aa12.64□□□□□ -0.39
HIF3A-211ENST00000528563 IFNA10P01566 189 aa12.64□□□□□ -0.39
HIF3A-211ENST00000528563 IGKV1-17P01599 117 aa12.64□□□□□ -0.39
HIF3A-211ENST00000528563 TCRBP04435 133 aa12.64□□□□□ -0.39
HIF3A-211ENST00000528563 CD7P09564 240 aa12.64□□□□□ -0.39
HIF3A-211ENST00000528563 TMEM116Q8NCL8 245 aa12.64□□□□□ -0.39
HIF3A-211ENST00000528563 NEURL2Q9BR09 285 aa12.64□□□□□ -0.39
HIF3A-211ENST00000528563 ADAP1O75689 374 aa12.63□□□□□ -0.39
HIF3A-211ENST00000528563 SCAF4O95104 1147 aaKnown RBP12.63□□□□□ -0.39
HIF3A-211ENST00000528563 SLC25A4P12235 298 aa12.63□□□□□ -0.39
HIF3A-211ENST00000528563 CD81P60033 236 aa12.63□□□□□ -0.39
HIF3A-211ENST00000528563 C4orf46Q504U0 113 aa12.63□□□□□ -0.39
HIF3A-211ENST00000528563 ZNF600Q6ZNG1 722 aa12.63□□□□□ -0.39
HIF3A-211ENST00000528563 NBEAL2Q6ZNJ1 2754 aa12.63□□□□□ -0.39
HIF3A-211ENST00000528563 DNAH9Q9NYC9 4486 aa12.62□□□□□ -0.39
HIF3A-211ENST00000528563 TRAV30A0A087WSZ9 112 aa12.62□□□□□ -0.39
HIF3A-211ENST00000528563 TRAV14DV4A0A0A6YYC5 116 aa12.62□□□□□ -0.39
HIF3A-211ENST00000528563 IGHV7-4-1A0A0J9YVY3 117 aa12.62□□□□□ -0.39
HIF3A-211ENST00000528563 ETFRF1Q6IPR1 90 aa12.62□□□□□ -0.39
HIF3A-211ENST00000528563 RBPMS2Q6ZRY4 209 aaKnown RBP12.62□□□□□ -0.39
HIF3A-211ENST00000528563 COQ8AQ8NI60 647 aa12.62□□□□□ -0.39
HIF3A-211ENST00000528563 RHPN1-AS1Q9BWJ2 59 aa12.62□□□□□ -0.39
HIF3A-211ENST00000528563 C20orf85Q9H1P6 137 aa12.62□□□□□ -0.39
HIF3A-211ENST00000528563 ZFAND3Q9H8U3 227 aa12.62□□□□□ -0.39
HIF3A-211ENST00000528563 PUS1Q9Y606 427 aaKnown RBP eCLIP12.62□□□□□ -0.39
HIF3A-211ENST00000528563 MPTX1A8MV57 137 aa12.61□□□□□ -0.39
HIF3A-211ENST00000528563 CHEK1O14757 476 aa12.61□□□□□ -0.39
HIF3A-211ENST00000528563 TSPAN4O14817 238 aa12.61□□□□□ -0.39
HIF3A-211ENST00000528563 MED6O75586 246 aa12.61□□□□□ -0.39
HIF3A-211ENST00000528563 RND2P52198 227 aa12.61□□□□□ -0.39
HIF3A-211ENST00000528563 ID3Q02535 119 aa12.61□□□□□ -0.39
HIF3A-211ENST00000528563 MITD1Q8WV92 249 aa12.61□□□□□ -0.39
HIF3A-211ENST00000528563 TBC1D24Q9ULP9 559 aa12.61□□□□□ -0.39
HIF3A-211ENST00000528563 SYNGR2O43760 224 aa12.6□□□□□ -0.39
HIF3A-211ENST00000528563 IGLC1P0CG04 106 aa12.6□□□□□ -0.39
HIF3A-211ENST00000528563 ASAH1Q13510 395 aa12.6□□□□□ -0.39
HIF3A-211ENST00000528563 ZNF846Q147U1 533 aa12.6□□□□□ -0.39
HIF3A-211ENST00000528563 TIGITQ495A1 244 aa12.6□□□□□ -0.39
HIF3A-211ENST00000528563 LINC00322Q6ZN03 302 aaPredicted RBP12.6□□□□□ -0.39
HIF3A-211ENST00000528563 NPIPB3Q92617 1050 aa12.6□□□□□ -0.39
HIF3A-211ENST00000528563 GINS3Q9BRX5 216 aa12.6□□□□□ -0.39
HIF3A-211ENST00000528563 WDR12Q9GZL7 423 aaKnown RBP12.6□□□□□ -0.39
HIF3A-211ENST00000528563 MAGT1Q9H0U3 335 aa12.6□□□□□ -0.39
HIF3A-211ENST00000528563 TUBA4BQ9H853 241 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms