RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 SNAPC5O75971 98 aa11.4□□□□□ -0.58
CHMP4A-203ENST00000527154 SCGNO76038 276 aa11.4□□□□□ -0.58
CHMP4A-203ENST00000527154 KRASP01116 189 aa11.4□□□□□ -0.58
CHMP4A-203ENST00000527154 ALDH3B2P48448 385 aa11.4□□□□□ -0.58
CHMP4A-203ENST00000527154 HOGA1Q86XE5 327 aa11.4□□□□□ -0.58
CHMP4A-203ENST00000527154 LYPD1Q8N2G4 141 aa11.4□□□□□ -0.58
CHMP4A-203ENST00000527154 GLMPQ8WWB7 406 aa11.4□□□□□ -0.58
CHMP4A-203ENST00000527154 NRG4Q8WWG1 115 aa11.4□□□□□ -0.58
CHMP4A-203ENST00000527154 CLUHP3Q96NS8 147 aa11.4□□□□□ -0.58
CHMP4A-203ENST00000527154 TSC22D3Q99576 134 aa11.4□□□□□ -0.58
CHMP4A-203ENST00000527154 TMED3Q9Y3Q3 217 aa11.4□□□□□ -0.58
CHMP4A-203ENST00000527154 HELTA6NFD8 242 aa11.39□□□□□ -0.59
CHMP4A-203ENST00000527154 INS-IGF2F8WCM5 200 aa11.39□□□□□ -0.59
CHMP4A-203ENST00000527154 HLA-DRB4P13762 266 aa11.39□□□□□ -0.59
CHMP4A-203ENST00000527154 G6PCP35575 357 aa11.39□□□□□ -0.59
CHMP4A-203ENST00000527154 PRCDQ00LT1 54 aa11.39□□□□□ -0.59
CHMP4A-203ENST00000527154 PSMG4Q5JS54 123 aa11.39□□□□□ -0.59
CHMP4A-203ENST00000527154 METTL26Q96S19 204 aa11.39□□□□□ -0.59
CHMP4A-203ENST00000527154 SRRM2Q9UQ35 2752 aaKnown RBP11.39□□□□□ -0.59
CHMP4A-203ENST00000527154 HLA-DRB4X5D2U9 266 aa11.39□□□□□ -0.59
CHMP4A-203ENST00000527154 NOTOA8MTQ0 251 aa11.38□□□□□ -0.59
CHMP4A-203ENST00000527154 PGLYRP1O75594 196 aaPredicted RBP11.38□□□□□ -0.59
CHMP4A-203ENST00000527154 LPAR6P43657 344 aa11.38□□□□□ -0.59
CHMP4A-203ENST00000527154 XGP55808 180 aa11.38□□□□□ -0.59
CHMP4A-203ENST00000527154 ZNF709Q8N972 641 aa11.38□□□□□ -0.59
CHMP4A-203ENST00000527154 BORCS5Q969J3 196 aa11.38□□□□□ -0.59
CHMP4A-203ENST00000527154 MOB3AQ96BX8 217 aa11.38□□□□□ -0.59
CHMP4A-203ENST00000527154 FAM90A26D6RGX4 464 aa11.37□□□□□ -0.59
CHMP4A-203ENST00000527154 PPP5CP53041 499 aa11.37□□□□□ -0.59
CHMP4A-203ENST00000527154 EMP1P54849 157 aa11.37□□□□□ -0.59
CHMP4A-203ENST00000527154 DHRS2Q13268 280 aa11.37□□□□□ -0.59
CHMP4A-203ENST00000527154 C16orf54Q6UWD8 224 aa11.37□□□□□ -0.59
CHMP4A-203ENST00000527154 TPRA1Q86W33 373 aa11.37□□□□□ -0.59
CHMP4A-203ENST00000527154 PINX1Q96BK5 328 aaKnown RBP11.37□□□□□ -0.59
CHMP4A-203ENST00000527154 KRTAP1-5Q9BYS1 174 aa11.37□□□□□ -0.59
CHMP4A-203ENST00000527154 FAM212BQ9NTI7 297 aaPredicted RBP11.37□□□□□ -0.59
CHMP4A-203ENST00000527154 DAPK2Q9UIK4 370 aa11.37□□□□□ -0.59
CHMP4A-203ENST00000527154 BLOC1S6Q9UL45 172 aa11.37□□□□□ -0.59
CHMP4A-203ENST00000527154 IGKV1-17P01599 117 aa11.36□□□□□ -0.59
CHMP4A-203ENST00000527154 RLN1P04808 185 aa11.36□□□□□ -0.59
CHMP4A-203ENST00000527154 HOXA1P49639 335 aaPredicted RBP11.36□□□□□ -0.59
CHMP4A-203ENST00000527154 AP2S1P53680 142 aaPredicted RBP11.36□□□□□ -0.59
CHMP4A-203ENST00000527154 FXYD4P59646 89 aa11.36□□□□□ -0.59
CHMP4A-203ENST00000527154 SEC22AQ96IW7 307 aa11.36□□□□□ -0.59
CHMP4A-203ENST00000527154 CNBD2Q96M20 576 aa11.36□□□□□ -0.59
CHMP4A-203ENST00000527154 MRPL36Q9P0J6 103 aaKnown RBP11.36□□□□□ -0.59
CHMP4A-203ENST00000527154 YTHDF2Q9Y5A9 579 aaKnown RBP11.36□□□□□ -0.59
CHMP4A-203ENST00000527154 CLN5O75503 358 aa11.35□□□□□ -0.59
CHMP4A-203ENST00000527154 ATP6V1G2O95670 118 aa11.35□□□□□ -0.59
CHMP4A-203ENST00000527154 HTN3P15516 51 aa11.35□□□□□ -0.59
CHMP4A-203ENST00000527154 NKX2-1P43699 371 aaPredicted RBP11.35□□□□□ -0.59
CHMP4A-203ENST00000527154 HSPE1P61604 102 aaKnown RBP11.35□□□□□ -0.59
CHMP4A-203ENST00000527154 Q5VSD8 79 aa11.35□□□□□ -0.59
CHMP4A-203ENST00000527154 DHRS11Q6UWP2 260 aa11.35□□□□□ -0.59
CHMP4A-203ENST00000527154 TMEM17Q86X19 198 aa11.35□□□□□ -0.59
CHMP4A-203ENST00000527154 OR4X1Q8NH49 305 aa11.35□□□□□ -0.59
CHMP4A-203ENST00000527154 LGALS14Q8TCE9 139 aa11.35□□□□□ -0.59
CHMP4A-203ENST00000527154 ATG101Q9BSB4 218 aa11.35□□□□□ -0.59
CHMP4A-203ENST00000527154 LINC00588Q9Y4M8 146 aa11.35□□□□□ -0.59
CHMP4A-203ENST00000527154 EIF2B2P49770 351 aaKnown RBP11.34□□□□□ -0.59
CHMP4A-203ENST00000527154 SNRPD3P62318 126 aaKnown RBP11.34□□□□□ -0.59
CHMP4A-203ENST00000527154 C1orf158Q8N1D5 194 aa11.34□□□□□ -0.59
CHMP4A-203ENST00000527154 OR5AP2Q8NGF4 316 aa11.34□□□□□ -0.59
CHMP4A-203ENST00000527154 FNDC4Q9H6D8 234 aaPredicted RBP11.34□□□□□ -0.59
CHMP4A-203ENST00000527154 TXNL4BQ9NX01 149 aaKnown RBP11.34□□□□□ -0.59
CHMP4A-203ENST00000527154 RHBDL2Q9NX52 303 aa11.34□□□□□ -0.59
CHMP4A-203ENST00000527154 RRP15Q9Y3B9 282 aaKnown RBP11.34□□□□□ -0.59
CHMP4A-203ENST00000527154 IGKV1-39P01597 117 aa11.33□□□□□ -0.6
CHMP4A-203ENST00000527154 IGKV1D-39P04432 117 aa11.33□□□□□ -0.6
CHMP4A-203ENST00000527154 ERHP84090 104 aaKnown RBP11.33□□□□□ -0.6
CHMP4A-203ENST00000527154 GDF5OSQ5U4N7 250 aa11.33□□□□□ -0.6
CHMP4A-203ENST00000527154 SFXN4Q6P4A7 337 aa11.33□□□□□ -0.6
CHMP4A-203ENST00000527154 IZUMO2Q6UXV1 221 aa11.33□□□□□ -0.6
CHMP4A-203ENST00000527154 C18orf15Q96N68 181 aa11.33□□□□□ -0.6
CHMP4A-203ENST00000527154 NRN1Q9NPD7 142 aa11.33□□□□□ -0.6
CHMP4A-203ENST00000527154 RAB26Q9ULW5 256 aa11.33□□□□□ -0.6
CHMP4A-203ENST00000527154 TRAV18A0A075B6X5 111 aa11.32□□□□□ -0.6
CHMP4A-203ENST00000527154 FCER2P06734 321 aa11.32□□□□□ -0.6
CHMP4A-203ENST00000527154 RPL5P46777 297 aaKnown RBP11.32□□□□□ -0.6
CHMP4A-203ENST00000527154 DAD1P61803 113 aa11.32□□□□□ -0.6
CHMP4A-203ENST00000527154 NARS2Q96I59 477 aaKnown RBP11.32□□□□□ -0.6
CHMP4A-203ENST00000527154 Q9H3A6 140 aa11.32□□□□□ -0.6
CHMP4A-203ENST00000527154 Q9H521 79 aa11.32□□□□□ -0.6
CHMP4A-203ENST00000527154 LOC102723971A0A1B0GUV8 181 aa11.31□□□□□ -0.6
CHMP4A-203ENST00000527154 CORTO00230 105 aa11.31□□□□□ -0.6
CHMP4A-203ENST00000527154 PSMB9P28065 219 aa11.31□□□□□ -0.6
CHMP4A-203ENST00000527154 GSG1LQ6UXU4 331 aa11.31□□□□□ -0.6
CHMP4A-203ENST00000527154 SAV1Q9H4B6 383 aaPredicted RBP11.31□□□□□ -0.6
CHMP4A-203ENST00000527154 ANAPC10Q9UM13 185 aa11.31□□□□□ -0.6
CHMP4A-203ENST00000527154 A0A0A6YYH2 397 aa11.3□□□□□ -0.6
CHMP4A-203ENST00000527154 A0A1W2PPQ1 181 aa11.3□□□□□ -0.6
CHMP4A-203ENST00000527154 A6NJ64 397 aa11.3□□□□□ -0.6
CHMP4A-203ENST00000527154 BUB3O43684 328 aa11.3□□□□□ -0.6
CHMP4A-203ENST00000527154 HBE1P02100 147 aa11.3□□□□□ -0.6
CHMP4A-203ENST00000527154 HNRNPCP07910 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHMP4A-203ENST00000527154 RNASE2P10153 161 aaKnown RBP11.3□□□□□ -0.6
CHMP4A-203ENST00000527154 CCL18P55774 89 aa11.3□□□□□ -0.6
CHMP4A-203ENST00000527154 MXD1Q05195 221 aa11.3□□□□□ -0.6
CHMP4A-203ENST00000527154 ZNF79Q15937 498 aa11.3□□□□□ -0.6
CHMP4A-203ENST00000527154 BSXQ3C1V8 233 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms