RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 TMEM30BQ3MIR4 351 aa11.48□□□□□ -0.57
LRRK1-202ENST00000525284 MPV17L2Q567V2 206 aa11.48□□□□□ -0.57
LRRK1-202ENST00000525284 LINC01560Q8TB33 94 aa11.48□□□□□ -0.57
LRRK1-202ENST00000525284 TRAV12-1A0A0B4J245 112 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 PATE3B3GLJ2 98 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 PRB2P02812 416 aaPredicted RBP11.47□□□□□ -0.57
LRRK1-202ENST00000525284 FAM90A2PQ658T7 463 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 SMCHD1A6NHR9 2005 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 IGHV3-53P01767 116 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 COL16A1Q07092 1604 aaPredicted RBP11.47□□□□□ -0.57
LRRK1-202ENST00000525284 DUSP14O95147 198 aaKnown RBP11.47□□□□□ -0.57
LRRK1-202ENST00000525284 EFEMP2O95967 443 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 UBE2V1Q13404 147 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 FAM201AQ5SY85 155 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 IMMP1LQ96LU5 166 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 DEPPQ9NTK1 212 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 ICE1Q9Y2F5 2266 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 NDUFS5O43920 106 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 NRN1LQ496H8 165 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 CHAC1Q9BUX1 264 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 PIN1P1O15428 100 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 SLC50A1Q9BRV3 221 aa11.47□□□□□ -0.57
LRRK1-202ENST00000525284 SNRNP200O75643 2136 aaKnown RBP11.46□□□□□ -0.57
LRRK1-202ENST00000525284 TRAV14DV4A0A0A6YYC5 116 aa11.46□□□□□ -0.57
LRRK1-202ENST00000525284 IGLV1-36A0A0B4J1U3 117 aa11.46□□□□□ -0.57
LRRK1-202ENST00000525284 C1QCP02747 245 aa11.46□□□□□ -0.57
LRRK1-202ENST00000525284 MYOD1P15172 320 aa11.46□□□□□ -0.57
LRRK1-202ENST00000525284 RSPO4Q2I0M5 234 aaPredicted RBP11.46□□□□□ -0.57
LRRK1-202ENST00000525284 OR13A1Q8NGR1 328 aa11.46□□□□□ -0.57
LRRK1-202ENST00000525284 OCC1Q8TAD7 63 aa11.46□□□□□ -0.57
LRRK1-202ENST00000525284 TRIP11Q15643 1979 aa11.46□□□□□ -0.57
LRRK1-202ENST00000525284 TRAV25A0A0B4J276 109 aa11.46□□□□□ -0.57
LRRK1-202ENST00000525284 CXorf51AA0A1B0GTR3 108 aa11.46□□□□□ -0.57
LRRK1-202ENST00000525284 D6R8Y8 96 aa11.46□□□□□ -0.57
LRRK1-202ENST00000525284 KLF17Q5JT82 389 aaPredicted RBP11.46□□□□□ -0.57
LRRK1-202ENST00000525284 TMEM258P61165 79 aa11.46□□□□□ -0.58
LRRK1-202ENST00000525284 HAPLN4Q86UW8 402 aa11.46□□□□□ -0.58
LRRK1-202ENST00000525284 UBE2CO00762 179 aa11.46□□□□□ -0.58
LRRK1-202ENST00000525284 FOCADQ5VW36 1801 aa11.46□□□□□ -0.58
LRRK1-202ENST00000525284 C12orf77C9JDV5 145 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 ZNF525Q8N782 197 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 OSTCQ9NRP0 149 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 IGHV1-45A0A0A0MS14 117 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 CD5P06127 495 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 HOXB1P14653 301 aaPredicted RBP11.45□□□□□ -0.58
LRRK1-202ENST00000525284 C1orf159Q96HA4 380 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 DOCK5Q9H7D0 1870 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 VDAC2P45880 294 aaPredicted RBP11.45□□□□□ -0.58
LRRK1-202ENST00000525284 RCHY1Q96PM5 261 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 FOXS1O43638 330 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 LIMS2Q7Z4I7 341 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 TTC3P53804 2025 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 TRAV13-1A0A0B4J241 112 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 LOC101059948A0A1B0GTJ6 334 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 A0A1W2PPV9 198 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 NDUFS6O75380 124 aaKnown RBP11.45□□□□□ -0.58
LRRK1-202ENST00000525284 GAGE1Q13065 139 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 GAGE4Q13068 117 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 GAGE5Q13069 117 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 GAGE6Q13070 117 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 COLCA1Q6ZS62 124 aa11.45□□□□□ -0.58
LRRK1-202ENST00000525284 IL9P15248 144 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 F2Z2F3 143 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 RNF125Q96EQ8 232 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 CCDC88CQ9P219 2028 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 LIMS1P48059 325 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 SPXQ9BT56 116 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 AMBPP02760 352 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 CACNG8Q8WXS5 425 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 SRXN1Q9BYN0 137 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 TRBV5-3A0A0A0MS03 114 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 MESP2Q0VG99 397 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 TCF15Q12870 199 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 ACP7Q6ZNF0 438 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 PRIMA1Q86XR5 153 aa11.44□□□□□ -0.58
LRRK1-202ENST00000525284 TCRAP04437 139 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 IFITM1P13164 125 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 ERCC8Q13216 396 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 FAM216BQ8N7L0 139 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 TSKUQ8WUA8 353 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 LCN12Q6JVE5 192 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 HIST3H2BBQ8N257 126 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 C7orf69Q9H7B7 122 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 TMEM14DPA8MWL7 114 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 B9A039 149 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 PEBP1P30086 187 aaKnown RBP11.43□□□□□ -0.58
LRRK1-202ENST00000525284 NABP1Q96AH0 204 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 IGKV2-40A0A087WW87 121 aaPredicted RBP11.43□□□□□ -0.58
LRRK1-202ENST00000525284 MYMXA0A1B0GTQ4 84 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 IGKV2D-40P01614 121 aaPredicted RBP11.43□□□□□ -0.58
LRRK1-202ENST00000525284 DUTP33316 252 aaKnown RBP11.43□□□□□ -0.58
LRRK1-202ENST00000525284 C8orf82Q6P1X6 216 aaPredicted RBP11.43□□□□□ -0.58
LRRK1-202ENST00000525284 UBL5Q9BZL1 73 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 CD55P08174 381 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 SELLP14151 372 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 CD24P25063 80 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 TMEM144Q7Z5S9 345 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 SPANXA1Q9NS26 97 aa11.43□□□□□ -0.58
LRRK1-202ENST00000525284 PLPPR1Q8TBJ4 325 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms