RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 YPEL1O60688 119 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 TSC22D2O75157 780 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 MT-ND4P03905 459 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 HIST1H1BP16401 226 aaKnown RBP4.4□□□□□ -1.71
NEDD8-203ENST00000524927 ALOX5APP20292 161 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 SERPINA2P20848 420 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 GZMMP51124 257 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 RPL39P5Q59GN2 51 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 BCL2L15Q5TBC7 163 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 ELP2Q6IA86 826 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 TPRA1Q86W33 373 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 LINC01561Q8N1V8 128 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 MTURNQ8N3F0 131 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 CBR4Q8N4T8 237 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 FAM24BQ8N5W8 94 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 SUMF2Q8NBJ7 301 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 OR10A6Q8NH74 314 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 PP6455Q8WZ26 134 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 YPEL2Q96QA6 119 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 C20orf27Q9GZN8 174 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 MS4A6AQ9H2W1 248 aa4.4□□□□□ -1.71
NEDD8-203ENST00000524927 PAK1IP1Q9NWT1 392 aaPredicted RBP4.4□□□□□ -1.71
NEDD8-203ENST00000524927 IGKV1-9A0A0C4DH69 117 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 OR2T8A6NH00 312 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 H3BNG1 76 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 HBE1P02100 147 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 PPP1CCP36873 323 aaKnown RBP4.39□□□□□ -1.71
NEDD8-203ENST00000524927 MRPL19P49406 292 aaKnown RBP4.39□□□□□ -1.71
NEDD8-203ENST00000524927 OR2B8PP59922 312 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 LAGE3Q14657 143 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 GNMTQ14749 295 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 TNXAQ16473 311 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 PRSS8Q16651 343 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 CGB2Q6NT52 195 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 UFSP1Q6NVU6 142 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 RPL13AP3Q6NVV1 102 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 TRMT10CQ7L0Y3 403 aaKnown RBP4.39□□□□□ -1.71
NEDD8-203ENST00000524927 FUNDC1Q8IVP5 155 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 CMTM1Q8IZ96 169 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 DRAXINQ8NBI3 349 aaPredicted RBP4.39□□□□□ -1.71
NEDD8-203ENST00000524927 CCDC54Q8NEL0 328 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 ZNF502Q8TBZ5 544 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 ZNF414Q96IQ9 312 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 PPDPFQ9H3Y8 114 aa4.39□□□□□ -1.71
NEDD8-203ENST00000524927 ZNF430Q9H8G1 570 aaPredicted RBP4.39□□□□□ -1.71
NEDD8-203ENST00000524927 NEBP20929 6669 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 ZNF207O43670 478 aaKnown RBP4.38□□□□□ -1.71
NEDD8-203ENST00000524927 SRSF10O75494 262 aaKnown RBP4.38□□□□□ -1.71
NEDD8-203ENST00000524927 DHFRP00374 187 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 APOA2P02652 100 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 DEFB130BP0DP73 79 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 DEFB130AP0DP74 79 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 PPT1P50897 306 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 LRRC23Q53EV4 343 aaPredicted RBP4.38□□□□□ -1.71
NEDD8-203ENST00000524927 OGFRL1Q5TC84 451 aaPredicted RBP4.38□□□□□ -1.71
NEDD8-203ENST00000524927 TTC23Q5W5X9 447 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 TCF24Q7RTU0 167 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 ZNF679Q8IYX0 411 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 C15orf54Q8N8G6 183 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 DUSP18Q8NEJ0 188 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 OR4B1Q8NGF8 309 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 CGREF1Q99674 301 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 NEK6Q9HC98 313 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 TRAPPC2LQ9UL33 140 aa4.38□□□□□ -1.71
NEDD8-203ENST00000524927 TRAV26-1A0A087WT03 109 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 PHOX2AO14813 284 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 GPX5O75715 221 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 ATF1P18846 271 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 M6PRP20645 277 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 KDELR2P33947 212 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 RPL29P47914 159 aaKnown RBP4.37□□□□□ -1.71
NEDD8-203ENST00000524927 GBX2P52951 348 aaPredicted RBP4.37□□□□□ -1.71
NEDD8-203ENST00000524927 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 RRN3P1Q2M238 152 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 TDRG1Q3Y452 100 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 SYT6Q5T7P8 510 aaPredicted RBP4.37□□□□□ -1.71
NEDD8-203ENST00000524927 UTS2BQ765I0 119 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 STX19Q8N4C7 294 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 OR5D18Q8NGL1 313 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 C7orf34Q96L11 122 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 OPALINQ96PE5 141 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 TAS2R1Q9NYW7 299 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 OR52A1Q9UKL2 312 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 RPH3ALQ9UNE2 315 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 AP3M1Q9Y2T2 418 aa4.37□□□□□ -1.71
NEDD8-203ENST00000524927 MFNGO00587 321 aa4.36□□□□□ -1.71
NEDD8-203ENST00000524927 SPAG7O75391 227 aa4.36□□□□□ -1.71
NEDD8-203ENST00000524927 SULT1C4O75897 302 aa4.36□□□□□ -1.71
NEDD8-203ENST00000524927 IFNGP01579 166 aa4.36□□□□□ -1.71
NEDD8-203ENST00000524927 MGMTP16455 207 aa4.36□□□□□ -1.71
NEDD8-203ENST00000524927 GSSP48637 474 aa4.36□□□□□ -1.71
NEDD8-203ENST00000524927 TIGITQ495A1 244 aa4.36□□□□□ -1.71
NEDD8-203ENST00000524927 ERICH5Q6P6B1 374 aa4.36□□□□□ -1.71
NEDD8-203ENST00000524927 VTCN1Q7Z7D3 282 aa4.36□□□□□ -1.71
NEDD8-203ENST00000524927 OR4C16Q8NGL9 310 aa4.36□□□□□ -1.71
NEDD8-203ENST00000524927 ACOT12Q8WYK0 555 aa4.36□□□□□ -1.71
NEDD8-203ENST00000524927 DGCR14Q96DF8 476 aaKnown RBP4.36□□□□□ -1.71
NEDD8-203ENST00000524927 TAF9BQ9HBM6 251 aa4.36□□□□□ -1.71
NEDD8-203ENST00000524927 BAIAP2Q9UQB8 552 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms