RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 A0A1W2PPV4 95 aa16.46■□□□□ 0.23
SQLE-206ENST00000523430 RNF223E7ERA6 249 aa16.46■□□□□ 0.23
SQLE-206ENST00000523430 AVPP01185 164 aa16.46■□□□□ 0.23
SQLE-206ENST00000523430 CRYGCP07315 174 aa16.46■□□□□ 0.23
SQLE-206ENST00000523430 SRP19P09132 144 aaKnown RBP16.46■□□□□ 0.23
SQLE-206ENST00000523430 Q5PR19 223 aa16.46■□□□□ 0.23
SQLE-206ENST00000523430 ASPHD1Q5U4P2 390 aa16.46■□□□□ 0.23
SQLE-206ENST00000523430 SPATA31B1PQ5VZV4 182 aa16.46■□□□□ 0.23
SQLE-206ENST00000523430 PSMG3-AS1Q96PY0 264 aa16.46■□□□□ 0.23
SQLE-206ENST00000523430 WNT10AQ9GZT5 417 aa16.46■□□□□ 0.23
SQLE-206ENST00000523430 SMDT1Q9H4I9 107 aa16.46■□□□□ 0.23
SQLE-206ENST00000523430 SEPSECSQ9HD40 501 aaKnown RBP16.46■□□□□ 0.23
SQLE-206ENST00000523430 CORTO00230 105 aa16.46■□□□□ 0.22
SQLE-206ENST00000523430 MT-CO2P00403 227 aa16.46■□□□□ 0.22
SQLE-206ENST00000523430 KHDC3LQ587J8 217 aa16.46■□□□□ 0.22
SQLE-206ENST00000523430 CYP2G1PQ6ZSU1 146 aa16.46■□□□□ 0.22
SQLE-206ENST00000523430 LINC01356Q8N9X3 169 aa16.46■□□□□ 0.22
SQLE-206ENST00000523430 GATAD1Q8WUU5 269 aa16.46■□□□□ 0.22
SQLE-206ENST00000523430 PTPN13Q12923 2485 aa16.45■□□□□ 0.22
SQLE-206ENST00000523430 IGHV7-81A0A0B4J1V7 117 aa16.45■□□□□ 0.22
SQLE-206ENST00000523430 HSPB1P04792 205 aaKnown RBP16.45■□□□□ 0.22
SQLE-206ENST00000523430 ZNF90Q03938 601 aa16.45■□□□□ 0.22
SQLE-206ENST00000523430 KLF17Q5JT82 389 aaPredicted RBP16.45■□□□□ 0.22
SQLE-206ENST00000523430 ETFRF1Q6IPR1 90 aa16.45■□□□□ 0.22
SQLE-206ENST00000523430 THAP8Q8NA92 274 aa16.45■□□□□ 0.22
SQLE-206ENST00000523430 HSPB9Q9BQS6 159 aa16.45■□□□□ 0.22
SQLE-206ENST00000523430 NKX6-2Q9C056 277 aaPredicted RBP16.45■□□□□ 0.22
SQLE-206ENST00000523430 C1RLQ9NZP8 487 aa16.45■□□□□ 0.22
SQLE-206ENST00000523430 CEBPGP53567 150 aa16.44■□□□□ 0.22
SQLE-206ENST00000523430 LRRC75A-AS1Q8N1F1 130 aa16.44■□□□□ 0.22
SQLE-206ENST00000523430 CYB561D1Q8N8Q1 229 aa16.44■□□□□ 0.22
SQLE-206ENST00000523430 IFNA1P01562 189 aa16.44■□□□□ 0.22
SQLE-206ENST00000523430 NPBWR1P48145 328 aa16.44■□□□□ 0.22
SQLE-206ENST00000523430 TCRBV4S1A1TA0A5B7 111 aa16.43■□□□□ 0.22
SQLE-206ENST00000523430 I3L2K1 104 aa16.43■□□□□ 0.22
SQLE-206ENST00000523430 HLA-DRB1P01911 266 aa16.43■□□□□ 0.22
SQLE-206ENST00000523430 ARL14EPLP0DKL9 152 aa16.43■□□□□ 0.22
SQLE-206ENST00000523430 LOXL1Q08397 574 aaPredicted RBP16.43■□□□□ 0.22
SQLE-206ENST00000523430 BTN1A1Q13410 526 aa16.43■□□□□ 0.22
SQLE-206ENST00000523430 TMEM219Q86XT9 240 aa16.43■□□□□ 0.22
SQLE-206ENST00000523430 SH2D7A6NKC9 451 aaPredicted RBP16.42■□□□□ 0.22
SQLE-206ENST00000523430 STAG3L2P0CL84 134 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 STAG3L3P0CL85 134 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 GATA3P23771 443 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 RHOBP62745 196 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 PMS2P11Q13670 270 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 KRTAP1-3Q8IUG1 177 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.42■□□□□ 0.22
SQLE-206ENST00000523430 PIFOQ8TCI5 191 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 RASL11BQ9BPW5 248 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 VAX2Q9UIW0 290 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 EGR2P11161 476 aaPredicted RBP16.42■□□□□ 0.22
SQLE-206ENST00000523430 FAM78BQ5VT40 261 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 MIR17HGQ75NE6 70 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 SLC35E3Q7Z769 313 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 TMEM116Q8NCL8 245 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 C22orf15Q8WYQ4 148 aa16.42■□□□□ 0.22
SQLE-206ENST00000523430 NPIPB5A8MRT5 1133 aa16.41■□□□□ 0.22
SQLE-206ENST00000523430 SNAPINO95295 136 aa16.41■□□□□ 0.22
SQLE-206ENST00000523430 SOHLH1Q5JUK2 328 aa16.41■□□□□ 0.22
SQLE-206ENST00000523430 MEGF9Q9H1U4 602 aa16.41■□□□□ 0.22
SQLE-206ENST00000523430 GSX1Q9H4S2 264 aaPredicted RBP16.41■□□□□ 0.22
SQLE-206ENST00000523430 MANBALQ9NQG1 85 aa16.41■□□□□ 0.22
SQLE-206ENST00000523430 ABCA12Q86UK0 2595 aa16.41■□□□□ 0.22
SQLE-206ENST00000523430 PSMB11A5LHX3 300 aa16.4■□□□□ 0.22
SQLE-206ENST00000523430 K7EIM0 57 aa16.4■□□□□ 0.22
SQLE-206ENST00000523430 RBMS3Q6XE24 437 aaKnown RBP16.4■□□□□ 0.22
SQLE-206ENST00000523430 SPNS3Q6ZMD2 512 aa16.4■□□□□ 0.22
SQLE-206ENST00000523430 C5orf56Q8N8D9 126 aa16.4■□□□□ 0.22
SQLE-206ENST00000523430 TNFRSF19Q9NS68 423 aa16.4■□□□□ 0.22
SQLE-206ENST00000523430 DOK5Q9P104 306 aa16.4■□□□□ 0.22
SQLE-206ENST00000523430 MAP1AP78559 2803 aaPredicted RBP16.4■□□□□ 0.22
SQLE-206ENST00000523430 DOPEY2Q9Y3R5 2298 aa16.39■□□□□ 0.22
SQLE-206ENST00000523430 CD81P60033 236 aa16.39■□□□□ 0.22
SQLE-206ENST00000523430 MEF2BQ02080 365 aaPredicted RBP16.39■□□□□ 0.22
SQLE-206ENST00000523430 TMEM249Q2WGJ8 235 aa16.39■□□□□ 0.22
SQLE-206ENST00000523430 TMEM37Q8WXS4 190 aa16.39■□□□□ 0.22
SQLE-206ENST00000523430 Q96MF0 132 aa16.39■□□□□ 0.22
SQLE-206ENST00000523430 SSX3Q99909 188 aa16.39■□□□□ 0.22
SQLE-206ENST00000523430 FUT9Q9Y231 359 aa16.39■□□□□ 0.22
SQLE-206ENST00000523430 FAM74A7A6NL05 159 aa16.39■□□□□ 0.21
SQLE-206ENST00000523430 PAGE4O60829 102 aa16.39■□□□□ 0.21
SQLE-206ENST00000523430 CXorf1O96002 111 aa16.39■□□□□ 0.21
SQLE-206ENST00000523430 TGFAP01135 160 aa16.39■□□□□ 0.21
SQLE-206ENST00000523430 OR5G3P0C626 314 aa16.39■□□□□ 0.21
SQLE-206ENST00000523430 IGHV4-31P0DP07 118 aa16.39■□□□□ 0.21
SQLE-206ENST00000523430 PSMB3P49720 205 aa16.39■□□□□ 0.21
SQLE-206ENST00000523430 FAM74A3Q4VXF1 159 aa16.39■□□□□ 0.21
SQLE-206ENST00000523430 TTC9CQ8N5M4 171 aa16.39■□□□□ 0.21
SQLE-206ENST00000523430 CLRN3Q8NCR9 226 aa16.39■□□□□ 0.21
SQLE-206ENST00000523430 MBD6Q96DN6 1003 aa16.39■□□□□ 0.21
SQLE-206ENST00000523430 IGLV11-55A0A075B6I3 123 aa16.38■□□□□ 0.21
SQLE-206ENST00000523430 RBM14Q96PK6 669 aaKnown RBP16.38■□□□□ 0.21
SQLE-206ENST00000523430 FANCD2OSQ96PS1 177 aa16.38■□□□□ 0.21
SQLE-206ENST00000523430 TRGV9Q99603 122 aa16.38■□□□□ 0.21
SQLE-206ENST00000523430 MOB4Q9Y3A3 225 aa16.38■□□□□ 0.21
SQLE-206ENST00000523430 CR1P17927 2039 aa16.38■□□□□ 0.21
SQLE-206ENST00000523430 APCP25054 2843 aa16.38■□□□□ 0.21
SQLE-206ENST00000523430 ATP6V0E1O15342 81 aa16.37■□□□□ 0.21
SQLE-206ENST00000523430 UBE2G2P60604 165 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms