RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 MRGPRFQ96AM1 343 aa16.35■□□□□ 0.21
PVT1-218ENST00000523328 KRTAP4-5Q9BYR2 181 aa16.35■□□□□ 0.21
PVT1-218ENST00000523328 CRYBB3P26998 211 aa16.34■□□□□ 0.21
PVT1-218ENST00000523328 SPINK9Q5DT21 86 aa16.34■□□□□ 0.21
PVT1-218ENST00000523328 ACTL10Q5JWF8 245 aa16.34■□□□□ 0.21
PVT1-218ENST00000523328 LYSMD2Q8IV50 215 aa16.34■□□□□ 0.21
PVT1-218ENST00000523328 RAB26Q9ULW5 256 aa16.34■□□□□ 0.21
PVT1-218ENST00000523328 LOC100506127A0A0U1RQW1 187 aa16.33■□□□□ 0.2
PVT1-218ENST00000523328 HRH1P35367 487 aa16.33■□□□□ 0.2
PVT1-218ENST00000523328 P2RY1P47900 373 aa16.33■□□□□ 0.2
PVT1-218ENST00000523328 PPP5CP53041 499 aa16.33■□□□□ 0.2
PVT1-218ENST00000523328 LGALS9BQ3B8N2 356 aa16.33■□□□□ 0.2
PVT1-218ENST00000523328 S100A16Q96FQ6 103 aaKnown RBP16.33■□□□□ 0.2
PVT1-218ENST00000523328 METTL26Q96S19 204 aa16.33■□□□□ 0.2
PVT1-218ENST00000523328 NDUFAF3Q9BU61 184 aa16.33■□□□□ 0.2
PVT1-218ENST00000523328 MRPL36Q9P0J6 103 aaKnown RBP16.33■□□□□ 0.2
PVT1-218ENST00000523328 INS-IGF2F8WCM5 200 aa16.32■□□□□ 0.2
PVT1-218ENST00000523328 TMEM127O75204 238 aa16.32■□□□□ 0.2
PVT1-218ENST00000523328 IZUMO4Q1ZYL8 232 aa16.32■□□□□ 0.2
PVT1-218ENST00000523328 S100GP29377 79 aa16.31■□□□□ 0.2
PVT1-218ENST00000523328 SNCAP37840 140 aa16.31■□□□□ 0.2
PVT1-218ENST00000523328 TAS2R20P59543 309 aa16.31■□□□□ 0.2
PVT1-218ENST00000523328 LPCAT3Q6P1A2 487 aa16.31■□□□□ 0.2
PVT1-218ENST00000523328 FNDC4Q9H6D8 234 aaPredicted RBP16.31■□□□□ 0.2
PVT1-218ENST00000523328 CLN5O75503 358 aa16.3■□□□□ 0.2
PVT1-218ENST00000523328 HLA-DMAP28067 261 aa16.3■□□□□ 0.2
PVT1-218ENST00000523328 UBE2NLQ5JXB2 153 aa16.3■□□□□ 0.2
PVT1-218ENST00000523328 TMEM69Q5SWH9 247 aa16.3■□□□□ 0.2
PVT1-218ENST00000523328 RAB40CQ96S21 281 aa16.3■□□□□ 0.2
PVT1-218ENST00000523328 RNASE2P10153 161 aaKnown RBP16.29■□□□□ 0.2
PVT1-218ENST00000523328 U3KQE9 123 aa16.29■□□□□ 0.2
PVT1-218ENST00000523328 HSPG2P98160 4391 aa16.29■□□□□ 0.2
PVT1-218ENST00000523328 CORTO00230 105 aa16.28■□□□□ 0.2
PVT1-218ENST00000523328 P0C879 139 aa16.28■□□□□ 0.2
PVT1-218ENST00000523328 PRSS3P35030 304 aa16.28■□□□□ 0.2
PVT1-218ENST00000523328 TSPAN5P62079 268 aa16.28■□□□□ 0.2
PVT1-218ENST00000523328 MLANAQ16655 118 aa16.28■□□□□ 0.2
PVT1-218ENST00000523328 KCTD21Q4G0X4 260 aa16.28■□□□□ 0.2
PVT1-218ENST00000523328 Q6ZR54 194 aa16.28■□□□□ 0.2
PVT1-218ENST00000523328 SLC35G3Q8N808 338 aa16.28■□□□□ 0.2
PVT1-218ENST00000523328 OR4X1Q8NH49 305 aa16.28■□□□□ 0.2
PVT1-218ENST00000523328 A0A0B4J293 547 aa16.27■□□□□ 0.2
PVT1-218ENST00000523328 IGKV1-17P01599 117 aa16.27■□□□□ 0.2
PVT1-218ENST00000523328 IGKV1-5P01602 117 aa16.27■□□□□ 0.2
PVT1-218ENST00000523328 CD74P04233 296 aa16.27■□□□□ 0.2
PVT1-218ENST00000523328 UCP3P55916 312 aa16.27■□□□□ 0.2
PVT1-218ENST00000523328 DHRS2Q13268 280 aa16.27■□□□□ 0.2
PVT1-218ENST00000523328 PSMG4Q5JS54 123 aa16.27■□□□□ 0.2
PVT1-218ENST00000523328 ZNF575Q86XF7 245 aa16.27■□□□□ 0.2
PVT1-218ENST00000523328 TMEM230Q96A57 120 aa16.27■□□□□ 0.2
PVT1-218ENST00000523328 NPY1RP25929 384 aa16.26■□□□□ 0.19
PVT1-218ENST00000523328 SUB1P53999 127 aaKnown RBP eCLIP16.26■□□□□ 0.19
PVT1-218ENST00000523328 SAMD12Q8N8I0 201 aa16.26■□□□□ 0.19
PVT1-218ENST00000523328 GPX8Q8TED1 209 aa16.26■□□□□ 0.19
PVT1-218ENST00000523328 GLMPQ8WWB7 406 aa16.26■□□□□ 0.19
PVT1-218ENST00000523328 NARS2Q96I59 477 aaKnown RBP16.26■□□□□ 0.19
PVT1-218ENST00000523328 C1QTNF4Q9BXJ3 329 aa16.26■□□□□ 0.19
PVT1-218ENST00000523328 XCL2Q9UBD3 114 aa16.26■□□□□ 0.19
PVT1-218ENST00000523328 NACAE9PAV3 2078 aa16.25■□□□□ 0.19
PVT1-218ENST00000523328 HELTA6NFD8 242 aa16.25■□□□□ 0.19
PVT1-218ENST00000523328 TGFBR1P36897 503 aa16.25■□□□□ 0.19
PVT1-218ENST00000523328 OPRK1P41145 380 aa16.25■□□□□ 0.19
PVT1-218ENST00000523328 TIGITQ495A1 244 aa16.25■□□□□ 0.19
PVT1-218ENST00000523328 CROCCP3Q8IVE0 287 aa16.25■□□□□ 0.19
PVT1-218ENST00000523328 IGLV2-18A0A075B6J9 118 aa16.24■□□□□ 0.19
PVT1-218ENST00000523328 IFNA10P01566 189 aa16.24■□□□□ 0.19
PVT1-218ENST00000523328 IFNA17P01571 189 aa16.24■□□□□ 0.19
PVT1-218ENST00000523328 ETV6P41212 452 aa16.24■□□□□ 0.19
PVT1-218ENST00000523328 RPL5P46777 297 aaKnown RBP16.24■□□□□ 0.19
PVT1-218ENST00000523328 EIF2B2P49770 351 aaKnown RBP16.24■□□□□ 0.19
PVT1-218ENST00000523328 NUTF2P61970 127 aaKnown RBP16.24■□□□□ 0.19
PVT1-218ENST00000523328 C16orf54Q6UWD8 224 aa16.24■□□□□ 0.19
PVT1-218ENST00000523328 Q6ZRM9 215 aa16.24■□□□□ 0.19
PVT1-218ENST00000523328 YTHDF1Q9BYJ9 559 aaKnown RBP16.24■□□□□ 0.19
PVT1-218ENST00000523328 H3BMM0 161 aa16.23■□□□□ 0.19
PVT1-218ENST00000523328 BSXQ3C1V8 233 aa16.23■□□□□ 0.19
PVT1-218ENST00000523328 ZNF705AQ6ZN79 300 aaPredicted RBP16.23■□□□□ 0.19
PVT1-218ENST00000523328 NEU1Q99519 415 aa16.23■□□□□ 0.19
PVT1-218ENST00000523328 FAM90A26D6RGX4 464 aa16.22■□□□□ 0.19
PVT1-218ENST00000523328 SCGB2A1O75556 95 aa16.22■□□□□ 0.19
PVT1-218ENST00000523328 IFNA21P01568 189 aa16.22■□□□□ 0.19
PVT1-218ENST00000523328 HOXA1P49639 335 aaPredicted RBP16.22■□□□□ 0.19
PVT1-218ENST00000523328 AKR1C2P52895 323 aa16.22■□□□□ 0.19
PVT1-218ENST00000523328 AP2S1P53680 142 aaPredicted RBP16.22■□□□□ 0.19
PVT1-218ENST00000523328 RND3P61587 244 aa16.22■□□□□ 0.19
PVT1-218ENST00000523328 TP53RKQ96S44 253 aa16.22■□□□□ 0.19
PVT1-218ENST00000523328 TRAV30A0A087WSZ9 112 aa16.21■□□□□ 0.19
PVT1-218ENST00000523328 ZNF705FA8MVS1 300 aaPredicted RBP16.21■□□□□ 0.19
PVT1-218ENST00000523328 HNRNPCP07910 306 aaKnown RBP eCLIP16.21■□□□□ 0.196e-7■□□□□ 9.7
PVT1-218ENST00000523328 ZNF705DP0CH99 300 aaPredicted RBP16.21■□□□□ 0.19
PVT1-218ENST00000523328 ZNF705BP0CI00 300 aaPredicted RBP16.21■□□□□ 0.19
PVT1-218ENST00000523328 SPART-AS1P0CW21 52 aa16.21■□□□□ 0.19
PVT1-218ENST00000523328 RPS19P39019 145 aaKnown RBP16.21■□□□□ 0.19
PVT1-218ENST00000523328 UBE2DNLQ8IWF7 75 aa16.21■□□□□ 0.19
PVT1-218ENST00000523328 PDCD10Q9BUL8 212 aa16.21■□□□□ 0.19
PVT1-218ENST00000523328 IGLC1P0CG04 106 aa16.2■□□□□ 0.18
PVT1-218ENST00000523328 NEDD8Q15843 81 aa16.2■□□□□ 0.18
PVT1-218ENST00000523328 FAM210BQ96KR6 192 aa16.2■□□□□ 0.18
PVT1-218ENST00000523328 SEPSECSQ9HD40 501 aaKnown RBP16.2■□□□□ 0.18
PVT1-218ENST00000523328 PI3P19957 117 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms