RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 THYN1Q9P016 225 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 DMRT1Q9Y5R6 373 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 BORCS7-ASMTA0A0B4J1R7 106 aa10.23□□□□□ -0.77
CPNE3-205ENST00000522240 G3V318 75 aa10.23□□□□□ -0.77
CPNE3-205ENST00000522240 EIF4EBP3O60516 100 aaPredicted RBP10.23□□□□□ -0.77
CPNE3-205ENST00000522240 JTBO76095 146 aa10.23□□□□□ -0.77
CPNE3-205ENST00000522240 PPIFP30405 207 aaKnown RBP10.23□□□□□ -0.77
CPNE3-205ENST00000522240 OPRK1P41145 380 aa10.23□□□□□ -0.77
CPNE3-205ENST00000522240 SLC25A24Q6NUK1 477 aa10.23□□□□□ -0.77
CPNE3-205ENST00000522240 SLC16A13Q7RTY0 426 aa10.23□□□□□ -0.77
CPNE3-205ENST00000522240 UBAC2Q8NBM4 344 aa10.23□□□□□ -0.77
CPNE3-205ENST00000522240 MISP3Q96FF7 219 aa10.23□□□□□ -0.77
CPNE3-205ENST00000522240 ZNF471Q9BX82 626 aaPredicted RBP10.23□□□□□ -0.77
CPNE3-205ENST00000522240 WFDC1Q9HC57 220 aa10.23□□□□□ -0.77
CPNE3-205ENST00000522240 CYTL1Q9NRR1 136 aa10.23□□□□□ -0.77
CPNE3-205ENST00000522240 TRBV9A0A0B4J1U6 114 aa10.22□□□□□ -0.77
CPNE3-205ENST00000522240 TMEM89A2RUT3 159 aa10.22□□□□□ -0.77
CPNE3-205ENST00000522240 SOX15O60248 233 aa10.22□□□□□ -0.77
CPNE3-205ENST00000522240 IFNA5P01569 189 aa10.22□□□□□ -0.77
CPNE3-205ENST00000522240 CRYBA1P05813 215 aa10.22□□□□□ -0.77
CPNE3-205ENST00000522240 TPT1P13693 172 aaKnown RBP10.22□□□□□ -0.77
CPNE3-205ENST00000522240 TMEM95Q3KNT9 176 aa10.22□□□□□ -0.77
CPNE3-205ENST00000522240 RPL7L1Q6DKI1 246 aaKnown RBP10.22□□□□□ -0.77
CPNE3-205ENST00000522240 Q6ZSV7 163 aa10.22□□□□□ -0.77
CPNE3-205ENST00000522240 OR5T1Q8NG75 326 aa10.22□□□□□ -0.77
CPNE3-205ENST00000522240 OR2T6Q8NHC8 308 aa10.22□□□□□ -0.77
CPNE3-205ENST00000522240 SLC35E1Q96K37 410 aa10.22□□□□□ -0.77
CPNE3-205ENST00000522240 NOL4LQ96MY1 436 aaPredicted RBP10.22□□□□□ -0.77
CPNE3-205ENST00000522240 FNDC4Q9H6D8 234 aaPredicted RBP10.22□□□□□ -0.77
CPNE3-205ENST00000522240 UBE2L5PA0A1B0GUS4 154 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 FAM223BA6NKX1 122 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 I3L2K1 104 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 K7EIM0 57 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 NDUFA7O95182 113 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 MT-CO2P00403 227 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 IGLV1-40P01703 118 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 IGHG4P01861 327 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 SLC35B1P78383 322 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 FAM223AQ8IWN6 122 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 ARV1Q9H2C2 271 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 C16orf95Q9H693 158 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 SLA2Q9H6Q3 261 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 SERTAD4Q9NUC0 356 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 LINC00527Q9UJ94 153 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 WDR83OSQ9Y284 106 aa10.21□□□□□ -0.77
CPNE3-205ENST00000522240 MPDU1O75352 247 aa10.2□□□□□ -0.78
CPNE3-205ENST00000522240 PRH1P02810 166 aa10.2□□□□□ -0.78
CPNE3-205ENST00000522240 MDKP21741 143 aaPredicted RBP10.2□□□□□ -0.78
CPNE3-205ENST00000522240 AKR1C1Q04828 323 aa10.2□□□□□ -0.78
CPNE3-205ENST00000522240 TMEM144Q7Z5S9 345 aa10.2□□□□□ -0.78
CPNE3-205ENST00000522240 NECAP1Q8NC96 275 aa10.2□□□□□ -0.78
CPNE3-205ENST00000522240 TMEM116Q8NCL8 245 aa10.2□□□□□ -0.78
CPNE3-205ENST00000522240 VN1R17PQ8TDU5 208 aa10.2□□□□□ -0.78
CPNE3-205ENST00000522240 ST8SIA2Q92186 375 aa10.2□□□□□ -0.78
CPNE3-205ENST00000522240 GINS3Q9BRX5 216 aa10.2□□□□□ -0.78
CPNE3-205ENST00000522240 WDR61Q9GZS3 305 aaKnown RBP10.2□□□□□ -0.78
CPNE3-205ENST00000522240 NPVFQ9HCQ7 196 aa10.2□□□□□ -0.78
CPNE3-205ENST00000522240 SMCO3A2RU48 225 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 PSMB11A5LHX3 300 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 OR2J3O76001 311 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 FCGR2BP31994 310 aaPredicted RBP10.19□□□□□ -0.78
CPNE3-205ENST00000522240 RHOGP84095 191 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 GAMTQ14353 236 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 TREML4Q6UXN2 200 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 BAP18Q8IXM2 172 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 COMMD1Q8N668 190 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 THAP8Q8NA92 274 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 OR4X1Q8NH49 305 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 SCGB1C1Q8TD33 95 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 TAF15Q92804 592 aaKnown RBP eCLIP10.19□□□□□ -0.78
CPNE3-205ENST00000522240 GNPNAT1Q96EK6 184 aaPredicted RBP10.19□□□□□ -0.78
CPNE3-205ENST00000522240 PHYHIPLQ96FC7 376 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 CXorf58Q96LI9 332 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 ATP6V0BQ99437 205 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 ZNF355PQ9NSJ1 428 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 FBXL7Q9UJT9 491 aa10.19□□□□□ -0.78
CPNE3-205ENST00000522240 LSM4Q9Y4Z0 139 aaKnown RBP10.19□□□□□ -0.78
CPNE3-205ENST00000522240 NDUFB8O95169 186 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 ELANEP08246 267 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 FGF7P21781 194 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 PSMB8P28062 276 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 RND2P52198 227 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 FOXE3Q13461 319 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 TEPPQ6URK8 271 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 BTNL8Q6UX41 500 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 RNF152Q8N8N0 203 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 ANAPC16Q96DE5 110 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 ACY3Q96HD9 319 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 USMG5Q96IX5 58 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 TXN2Q99757 166 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 PSMG3Q9BT73 122 aaPredicted RBP10.18□□□□□ -0.78
CPNE3-205ENST00000522240 KCNIP2Q9NS61 270 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 TIMM9Q9Y5J7 89 aa10.18□□□□□ -0.78
CPNE3-205ENST00000522240 MFSD2BA6NFX1 497 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 SCGB2A1O75556 95 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 TRGV3P03979 118 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 PF4V1P10720 104 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 ATP6V0CP27449 155 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 NPBWR1P48145 328 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 MFAP4P55083 255 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms