RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 LHFPL5Q8TAF8 219 aa2.53□□□□□ -2
CTNNA1-233ENST00000522052 RPS4Y2Q8TD47 263 aa2.53□□□□□ -2
CTNNA1-233ENST00000522052 ANKRD7Q92527 254 aa2.53□□□□□ -2
CTNNA1-233ENST00000522052 TRIM4Q9C037 500 aa2.53□□□□□ -2
CTNNA1-233ENST00000522052 CXorf21Q9HAI6 301 aa2.53□□□□□ -2
CTNNA1-233ENST00000522052 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.53□□□□□ -2
CTNNA1-233ENST00000522052 HSPE1-MOB4S4R3N1 261 aa2.53□□□□□ -2
CTNNA1-233ENST00000522052 ADGRG4Q8IZF6 3080 aa2.53□□□□□ -2
CTNNA1-233ENST00000522052 CSMD1Q96PZ7 3565 aa2.53□□□□□ -2
CTNNA1-233ENST00000522052 ACACAQ13085 2346 aa2.53□□□□□ -2
CTNNA1-233ENST00000522052 AHCTF1Q8WYP5 2266 aa2.53□□□□□ -2
CTNNA1-233ENST00000522052 PKD1L1Q8TDX9 2849 aa2.53□□□□□ -2
CTNNA1-233ENST00000522052 NAV1Q8NEY1 1877 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 URB1O60287 2271 aaKnown RBP2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 EEF1E1-BLOC1S5C9J1V9 151 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 UBFD1O14562 309 aaKnown RBP2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 IFNA6P05013 189 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 CTSGP08311 255 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 CYBAP13498 195 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 CPMP14384 443 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 ZNF140P52738 457 aaPredicted RBP2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 PSG4Q00888 419 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 SRSF6Q13247 344 aaKnown RBP2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 TAF9Q16594 264 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 SPATA12Q7Z6I5 190 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 LRRC25Q8N386 305 aaPredicted RBP2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 SLC22A24Q8N4F4 322 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 CNEP1R1Q8N9A8 125 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 SFRP2Q96HF1 295 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 PRAP1Q96NZ9 151 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 GPR84Q9NQS5 396 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 TXNL4BQ9NX01 149 aaKnown RBP2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 ZNF337Q9Y3M9 751 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 OTOFQ9HC10 1997 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 SPENQ96T58 3664 aaKnown RBP2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 PHIPQ8WWQ0 1821 aa2.52□□□□□ -2.01
CTNNA1-233ENST00000522052 CACNA1DQ01668 2161 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 DSCAML1Q8TD84 2053 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 FANCMQ8IYD8 2048 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 A0A087WUU8 490 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 OR5K4A6NMS3 321 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 INMT-MINDY4F8WBC2 141 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 TRAPPC3O43617 180 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 CHP2O43745 196 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 IGHV1-69P01742 117 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 CD79AP11912 226 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 CD200P41217 278 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 GABRA2P47869 451 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 ERVS71-1P61550 626 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 REEP5Q00765 189 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 PACRGLQ8N7B6 248 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 OR5C1Q8NGR4 320 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 OR1L8Q8NGR8 309 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 OR52E6Q96RD3 313 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 AICDAQ9GZX7 198 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 TMEM222Q9H0R3 208 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 TAAR3PQ9P1P4 343 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 AK3Q9UIJ7 227 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 ANGPT4Q9Y264 503 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 LOC285556D6RIA3 1793 aa2.51□□□□□ -2.01
CTNNA1-233ENST00000522052 PDZD2O15018 2839 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 IBTKQ9P2D0 1353 aaPredicted RBP2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 COL5A1P20908 1838 aaPredicted RBP2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 IGKV3D-11A0A0A0MRZ8 115 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 A0A1B0GW54 56 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 VPS37CA5D8V6 355 aaPredicted RBP2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 E7EQL1 145 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 LST1O00453 97 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 RPL27AP46776 148 aaKnown RBP2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 TAS2R30P59541 319 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 GNA12Q03113 381 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 CAV1Q03135 178 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 ACOT6Q3I5F7 207 aaPredicted RBP2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 AKIRIN2Q53H80 203 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 HCP5Q6MZN7 132 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 TCF24Q7RTU0 167 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 OR2T4Q8NH00 348 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 CLDND2Q8NHS1 167 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 SGMS2Q8NHU3 365 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 NMNAT3Q96T66 252 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 FAM96AQ9H5X1 160 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 SHROOM3Q8TF72 1996 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 PCLOQ9Y6V0 5065 aa2.5□□□□□ -2.01
CTNNA1-233ENST00000522052 NIPBLQ6KC79 2804 aaeCLIP2.5□□□□□ -2.012e-7■■■■□ 20.4
CTNNA1-233ENST00000522052 PLXNB2O15031 1838 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 CHD5Q8TDI0 1954 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 IGHV3-15A0A0B4J1V0 119 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 H3BPC8 53 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 GZMBP10144 247 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 FGF6P10767 208 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 RBM11P57052 281 aaKnown RBP2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 TNFAIP8L3Q5GJ75 292 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 C2orf91Q6ZV80 131 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 DEFB128Q7Z7B8 93 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 CNBD2Q96M20 576 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 PAIP2Q9BPZ3 127 aaKnown RBP2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 PRELID1Q9Y255 219 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 MINOS1-NBL1R4GNA1 71 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 CACNA1EQ15878 2313 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms