RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 RND2P52198 227 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 MFAP4P55083 255 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 DEFA5Q01523 94 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 RAB31Q13636 194 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 KLK9Q2XQG4 91 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 C15orf32Q32M92 178 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 TEX38Q6PEX7 206 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 TEPPQ6URK8 271 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 TMEM144Q7Z5S9 345 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 CENPVQ7Z7K6 275 aaPredicted RBP7□□□□□ -1.29
CSMD1-208ENST00000520561 BAP18Q8IXM2 172 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 COMMD1Q8N668 190 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 ZNF709Q8N972 641 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 UBAC2Q8NBM4 344 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 HSD17B11Q8NBQ5 300 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 VN1R17PQ8TDU5 208 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 ST8SIA2Q92186 375 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 EEF1AKMT3Q96AZ1 226 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 GNPNAT1Q96EK6 184 aaPredicted RBP7□□□□□ -1.29
CSMD1-208ENST00000520561 WDR61Q9GZS3 305 aaKnown RBP7□□□□□ -1.29
CSMD1-208ENST00000520561 C16orf95Q9H693 158 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 NPVFQ9HCQ7 196 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 SERTAD4Q9NUC0 356 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 C21orf62Q9NYP8 219 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 KLK9Q9UKQ9 250 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 WDR83OSQ9Y284 106 aa7□□□□□ -1.29
CSMD1-208ENST00000520561 SETXQ7Z333 2677 aaKnown RBP6.99□□□□□ -1.29
CSMD1-208ENST00000520561 HIVEP1P15822 2718 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 MFSD2BA6NFX1 497 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 ZFP92A6NM28 416 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 IGLV1-40P01703 118 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 IGHV3-48P01763 117 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 ELANEP08246 267 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 NPBWR1P48145 328 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 ATP5G2Q06055 141 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 FOXE3Q13461 319 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 GAMTQ14353 236 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 Q56UQ5 140 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 EIF5AL1Q6IS14 154 aaKnown RBP6.99□□□□□ -1.29
CSMD1-208ENST00000520561 BTNL8Q6UX41 500 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 ZNF329Q86UD4 541 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 TMEM116Q8NCL8 245 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 OR4X2Q8NGF9 303 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 OR4X1Q8NH49 305 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 SCARB1Q8WTV0 552 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 NPIPB3Q92617 1050 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 TAF15Q92804 592 aaKnown RBP eCLIP6.99□□□□□ -1.29
CSMD1-208ENST00000520561 USMG5Q96IX5 58 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 GINS3Q9BRX5 216 aa6.99□□□□□ -1.29
CSMD1-208ENST00000520561 GAR1Q9NY12 217 aaKnown RBP6.99□□□□□ -1.29
CSMD1-208ENST00000520561 FN1P02751 2386 aaKnown RBP6.99□□□□□ -1.29
CSMD1-208ENST00000520561 MTORP42345 2549 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 TRAV30A0A087WSZ9 112 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 TRBV7-1A0A0A6YYK4 115 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 A0A0G2JLM5 398 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 GNG7O60262 68 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 CLN5O75503 358 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 FABP1P07148 127 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 ATP6V0CP27449 155 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 PSMB8P28062 276 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 CAMLGP49069 296 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 RUNX1Q01196 453 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 MLANAQ16655 118 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 FAM209BQ5JX69 171 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 TREML4Q6UXN2 200 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 KLHDC1Q8N7A1 406 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 THAP8Q8NA92 274 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 PHYHIPLQ96FC7 376 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 TXN2Q99757 166 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 PSMG3Q9BT73 122 aaPredicted RBP6.98□□□□□ -1.29
CSMD1-208ENST00000520561 RSG1Q9BU20 258 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 NPCDR1Q9BY65 106 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 ARV1Q9H2C2 271 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 LSM4Q9Y4Z0 139 aaKnown RBP6.98□□□□□ -1.29
CSMD1-208ENST00000520561 TIMM9Q9Y5J7 89 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 S4R3C0 116 aa6.98□□□□□ -1.29
CSMD1-208ENST00000520561 TCRBV4S1A1TA0A5B7 111 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 AGPAT2O15120 278 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 IFNA7P01567 189 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 IGHV3-23P01764 117 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 SEC11BP0C7V7 166 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 MDKP21741 143 aaPredicted RBP6.97□□□□□ -1.29
CSMD1-208ENST00000520561 OR10J1P30954 320 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 FCGR2BP31994 310 aaPredicted RBP6.97□□□□□ -1.29
CSMD1-208ENST00000520561 GPR183P32249 361 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 RAB9AP51151 201 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 KHDC1LQ5JSQ8 128 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 CYP2G1PQ6ZSU1 146 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 LINC01006Q8NI28 216 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 ZNF502Q8TBZ5 544 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 ATP6V0BQ99437 205 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 TRGV9Q99603 122 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 MGST2Q99735 147 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 GGTLC1Q9BX51 225 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 SH3BGRL3Q9H299 93 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 SLC25A32Q9H2D1 315 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 KLK15Q9H2R5 256 aa6.97□□□□□ -1.29
CSMD1-208ENST00000520561 MRPL36Q9P0J6 103 aaKnown RBP6.97□□□□□ -1.29
CSMD1-208ENST00000520561 NSD1Q96L73 2696 aaPredicted RBP6.96□□□□□ -1.29
CSMD1-208ENST00000520561 A0A1B0GUS0 222 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms