RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 TTC9CQ8N5M4 171 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 SLC24A4Q8NFF2 622 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 OR5AU1Q8NGC0 362 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 OR2G3Q8NGZ4 309 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 SCGB1C1Q8TD33 95 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 WIPF2Q8TF74 440 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-206ENST00000519115 CITED2Q99967 270 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-206ENST00000519115 RASL11BQ9BPW5 248 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 HSPB9Q9BQS6 159 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 TMEM147Q9BVK8 224 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 KCNIP2Q9NS61 270 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 UQCC1Q9NVA1 299 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 FBXL17Q9UF56 701 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 FBXO7Q9Y3I1 522 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 NOTCH3Q9UM47 2321 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 RPS10-NUDT3A0A1W2PQS6 291 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 IGLC7A0M8Q6 106 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 KCNAB3O43448 404 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 CST7O76096 145 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 IGHG2P01859 326 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 IGF1P05019 195 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 RNASE2P10153 161 aaKnown RBP5.95□□□□□ -1.46
SDCBP-206ENST00000519115 HIST1H1BP16401 226 aaKnown RBP5.95□□□□□ -1.46
SDCBP-206ENST00000519115 FCGR2BP31994 310 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-206ENST00000519115 HOXA1P49639 335 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-206ENST00000519115 SULT1A2P50226 295 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 BLOC1S1P78537 153 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 PLGLAQ15195 96 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 KHDC1LQ5JSQ8 128 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 FAM209BQ5JX69 171 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 PRR31Q5SQ13 230 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 ETV3LQ6ZN32 361 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 TMEM144Q7Z5S9 345 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 SRSF12Q8WXF0 261 aaKnown RBP5.95□□□□□ -1.46
SDCBP-206ENST00000519115 FBXL15Q9H469 300 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 THYN1Q9P016 225 aa5.95□□□□□ -1.46
SDCBP-206ENST00000519115 PSMB11A5LHX3 300 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 CGB1A6NKQ9 187 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 ADARB2-AS1A8MUL3 147 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 TEX22C9J3V5 150 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 C17orf112F2Z3M2 114 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 H3BUA1 57 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 NDUFS6O75380 124 aaKnown RBP5.94□□□□□ -1.46
SDCBP-206ENST00000519115 CNIH1O95406 144 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 CFDP00746 253 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-206ENST00000519115 CA2P00918 260 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 IFNA4P05014 189 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 METTL15P1P0C7V9 234 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 IAPPP10997 89 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 CTRB1P17538 263 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 ATF4P18848 351 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-206ENST00000519115 SELENOTP62341 195 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 CX3CL1P78423 397 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 SSBP2P81877 361 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-206ENST00000519115 WT1-ASQ06250 92 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 CD69Q07108 199 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 SLC38A11Q08AI6 406 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 FXYD3Q14802 87 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 TCTEX1D4Q5JR98 221 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 PXDC1Q5TGL8 231 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 RPL7L1Q6DKI1 246 aaKnown RBP5.94□□□□□ -1.46
SDCBP-206ENST00000519115 CTRB2Q6GPI1 263 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 LILRB2Q8N423 598 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 COMMD1Q8N668 190 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 TMEM116Q8NCL8 245 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 OR4X2Q8NGF9 303 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 LYPD6BQ8NI32 183 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 FAM110DQ8TAY7 271 aaPredicted RBP5.94□□□□□ -1.46
SDCBP-206ENST00000519115 OR4C12Q96R67 309 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 TXN2Q99757 166 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 WDR61Q9GZS3 305 aaKnown RBP5.94□□□□□ -1.46
SDCBP-206ENST00000519115 WFDC1Q9HC57 220 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 PARP11Q9NR21 331 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 TPSG1Q9NRR2 321 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 WDR83OSQ9Y284 106 aa5.94□□□□□ -1.46
SDCBP-206ENST00000519115 LSM4Q9Y4Z0 139 aaKnown RBP5.94□□□□□ -1.46
SDCBP-206ENST00000519115 F11RQ9Y624 299 aaKnown RBP5.94□□□□□ -1.46
SDCBP-206ENST00000519115 TRAV1-1A0A0B4J248 108 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 TCRBV4S1A1TA0A5B7 111 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 LINC00862A6NCI5 91 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 AP4M1O00189 453 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 FCN1O00602 326 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 ATP6V0E1O15342 81 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 OR13C7P0DN81 318 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 RPL29P47914 159 aaKnown RBP5.93□□□□□ -1.46
SDCBP-206ENST00000519115 NDPQ00604 133 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 ARL16Q0P5N6 197 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 PJVKQ0ZLH3 352 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 TNXAQ16473 311 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 TEPPQ6URK8 271 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 LCNL1Q6ZST4 164 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 HAPLN4Q86UW8 402 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 EIF4E3Q8N5X7 224 aaKnown RBP5.93□□□□□ -1.46
SDCBP-206ENST00000519115 TMEM217Q8N7C4 229 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 ZNF709Q8N972 641 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 ABHD5Q8WTS1 349 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 TMEM170AQ8WVE7 144 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 TMEM190Q8WZ59 177 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 ARPC1AQ92747 370 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 P2RX4Q99571 388 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms