RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 TCRBV4S1A1TA0A5B7 111 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 MAP1LC3B2A6NCE7 125 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 ZFP92A6NM28 416 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 I3L2K1 104 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 ATP6V0E1O15342 81 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 CDC34P49427 236 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 PEA15Q15121 130 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 LY6EQ16553 131 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 KLK9Q2XQG4 91 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 FAM122CQ6P4D5 195 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 UNQ5815/PRO19632Q6UWF5 114 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 OR4X1Q8NH49 305 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 FAM210AQ96ND0 272 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 RNF2Q99496 336 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 MAP1LC3BQ9GZQ8 125 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 KLK9Q9UKQ9 250 aa11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 SOX21Q9Y651 276 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-205ENST00000518839 APCP25054 2843 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 IGKV1OR2-108A0A075B7D4 117 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 SMAD7O15105 426 aaKnown RBP11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 CD5LO43866 347 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 SCGB2A1O75556 95 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 YIF1AO95070 293 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 IFNA1P01562 189 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 FABP1P07148 127 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 IER3P46695 156 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 RHOBP62745 196 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 PMS2P11Q13670 270 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 ZNF726P1Q15940 193 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 LCN15Q6UWW0 184 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 BCL6BQ8N143 479 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 CIARTQ8N365 385 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 BPIFCQ8NFQ6 507 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 TMUB1Q9BVT8 246 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 PRDM13Q9H4Q3 707 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 DMRT1Q9Y5R6 373 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 TACC2O95359 2948 aa11.87□□□□□ -0.51
TRAPPC9-205ENST00000518839 ABCA1O95477 2261 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 CELSR2Q9HCU4 2923 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 TRAV30A0A087WSZ9 112 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 K7EIM0 57 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 AMY1AP04745 511 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 LINC00869P0C866 280 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 ZP3P21754 424 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 TAGLN2P37802 199 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 NPBWR1P48145 328 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 GUK1Q16774 197 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 ECSCRQ19T08 205 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 TOR2AQ5JU69 321 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 Q6YL49 198 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 C19orf35Q6ZS72 473 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 RAB24Q969Q5 203 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 ZNF48Q96MX3 618 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 FANCD2OSQ96PS1 177 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 PFDN5Q99471 154 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 SLC25A22Q9H936 323 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 TREM1Q9NP99 234 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 TNFRSF19Q9NS68 423 aa11.86□□□□□ -0.51
TRAPPC9-205ENST00000518839 CREBBPQ92793 2442 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 IGKV1D-37A0A075B6S9 117 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 MDFIC2A0A1B0GVS7 189 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 CLN5O75503 358 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 IGHG2P01859 326 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 IGF1P05019 195 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 CD5P06127 495 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 PPT1P50897 306 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 MFAP4P55083 255 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 SLC35E3Q7Z769 313 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 OR5T1Q8NG75 326 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 GATAD1Q8WUU5 269 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 MRPL32Q9BYC8 188 aaKnown RBP11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 EIF5A2Q9GZV4 153 aaKnown RBP11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 ZNF580Q9UK33 172 aa11.85□□□□□ -0.51
TRAPPC9-205ENST00000518839 TRAV41A0A0B4J266 112 aa11.84□□□□□ -0.51
TRAPPC9-205ENST00000518839 A0A1B0GV50 99 aa11.84□□□□□ -0.51
TRAPPC9-205ENST00000518839 RBFOX3A6NFN3 312 aa11.84□□□□□ -0.51
TRAPPC9-205ENST00000518839 IGHV4-59P01825 116 aa11.84□□□□□ -0.51
TRAPPC9-205ENST00000518839 C9orf152Q5JTZ5 239 aa11.84□□□□□ -0.51
TRAPPC9-205ENST00000518839 RBMS3Q6XE24 437 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-205ENST00000518839 VN1R17PQ8TDU5 208 aa11.84□□□□□ -0.51
TRAPPC9-205ENST00000518839 NARS2Q96I59 477 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-205ENST00000518839 TXN2Q99757 166 aa11.84□□□□□ -0.51
TRAPPC9-205ENST00000518839 MRPL36Q9P0J6 103 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-205ENST00000518839 VPREB3Q9UKI3 123 aa11.84□□□□□ -0.51
TRAPPC9-205ENST00000518839 CENPEQ02224 2701 aa11.84□□□□□ -0.51
TRAPPC9-205ENST00000518839 TMEM218A2RU14 115 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 H3BUA1 57 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 AP4M1O00189 453 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 BRI3O95415 125 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 IGHV3-48P01763 117 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 OR5G3P0C626 314 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 IGLC1P0CG04 106 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 HNF1AP20823 631 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 FCGR2BP31994 310 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 PSMB3P49720 205 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 TAS2R45P59539 299 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 CCL20P78556 96 aa11.83□□□□□ -0.52
TRAPPC9-205ENST00000518839 KHDC3LQ587J8 217 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms