RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 TLCD1Q96CP7 247 aa2.78□□□□□ -1.96
RFC1-216ENST00000514572 CCL19Q99731 98 aa2.78□□□□□ -1.96
RFC1-216ENST00000514572 TTTY12Q9BZ98 90 aa2.78□□□□□ -1.96
RFC1-216ENST00000514572 PCBD2Q9H0N5 130 aa2.78□□□□□ -1.96
RFC1-216ENST00000514572 HRASLSQ9HDD0 168 aa2.78□□□□□ -1.96
RFC1-216ENST00000514572 ZNF443Q9Y2A4 671 aaPredicted RBP2.78□□□□□ -1.96
RFC1-216ENST00000514572 PHLDA3Q9Y5J5 127 aa2.78□□□□□ -1.96
RFC1-216ENST00000514572 FAM215AQ9Y5M1 114 aa2.78□□□□□ -1.96
RFC1-216ENST00000514572 U3KQK5 164 aa2.78□□□□□ -1.96
RFC1-216ENST00000514572 WNK2Q9Y3S1 2297 aa2.78□□□□□ -1.96
RFC1-216ENST00000514572 KIAA1549Q9HCM3 1950 aa2.78□□□□□ -1.97
RFC1-216ENST00000514572 NCKAP5O14513 1909 aa2.78□□□□□ -1.97
RFC1-216ENST00000514572 NBEAL2Q6ZNJ1 2754 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 CR1P17927 2039 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 IGKV1D-37A0A075B6S9 117 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 hCG_1818297A0A087WSY0 165 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 TRGV5A0A0B4J1U4 118 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 B4DEV8 164 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 EEF1E1-BLOC1S5C9J1V9 151 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 E5RI56 91 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 COPEO14579 308 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 EEF1E1O43324 174 aaKnown RBP2.77□□□□□ -1.97
RFC1-216ENST00000514572 DENRO43583 198 aaKnown RBP2.77□□□□□ -1.97
RFC1-216ENST00000514572 ISG15P05161 165 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 CRYBA1P05813 215 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 RPS3P23396 243 aaKnown RBP eCLIP2.77□□□□□ -1.97
RFC1-216ENST00000514572 OPRM1P35372 400 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 FOXA1P55317 472 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 GABARAPL2P60520 117 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 CTAG1AP78358 180 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 TMEM267Q0VDI3 215 aaPredicted RBP2.77□□□□□ -1.97
RFC1-216ENST00000514572 PPP1R1AQ13522 171 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 BCL2A1Q16548 175 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 PRR9Q5T870 116 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 GPR32P1Q8NGA4 272 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 OR1P1Q8NH06 330 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 OR2V1Q8NHB1 315 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 TSLPQ969D9 159 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 CCDC42Q96M95 316 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 PRAP1Q96NZ9 151 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 OR51B6Q9H340 312 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 BOKQ9UMX3 212 aaPredicted RBP2.77□□□□□ -1.97
RFC1-216ENST00000514572 MRPS16Q9Y3D3 137 aaKnown RBP2.77□□□□□ -1.97
RFC1-216ENST00000514572 R4GN34 69 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 DSCAML1Q8TD84 2053 aa2.77□□□□□ -1.97
RFC1-216ENST00000514572 A6NED7 52 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 OR51F1A6NGY5 319 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 VGLL3A8MV65 326 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 LECT2O14960 151 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 SH2D1AO60880 128 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 OR2J2O76002 312 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 GYPCP04921 128 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 OR13C7P0DN81 318 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 NQO1P15559 274 aaKnown RBP2.76□□□□□ -1.97
RFC1-216ENST00000514572 CDK2P24941 298 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 RPL12P30050 165 aaKnown RBP2.76□□□□□ -1.97
RFC1-216ENST00000514572 OR1E2P47887 323 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 KLF3P57682 345 aaPredicted RBP2.76□□□□□ -1.97
RFC1-216ENST00000514572 DHRS2Q13268 280 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 OR8G1Q15617 311 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 CCSMST1Q4G0I0 132 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 DEFB134Q4QY38 66 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 C10orf91Q5T1B1 145 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 LRP11Q86VZ4 500 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 KRT222Q8N1A0 295 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 ZFAND2AQ8N6M9 145 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 BPIFB6Q8NFQ5 453 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 OR8K1Q8NGG5 319 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 ZNF721Q8TF20 911 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 MMACHCQ9Y4U1 282 aa2.76□□□□□ -1.97
RFC1-216ENST00000514572 TRRAPQ9Y4A5 3859 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 TRBV24-1A0A075B6N3 115 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 IGKV3D-11A0A0A0MRZ8 115 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 A0A0B4J2C4 111 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 ZNF860A6NHJ4 632 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 C4orf51C9J302 202 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 TP53I11O14683 189 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 STATHP02808 62 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 IFNA16P05015 189 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 IL6P05231 212 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 GUSBP08236 651 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 IL3P08700 152 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 ZNF708P17019 499 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 ORM2P19652 201 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 FGF12P61328 243 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 RPS11P62280 158 aaKnown RBP eCLIP2.75□□□□□ -1.97
RFC1-216ENST00000514572 TBPL1P62380 186 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 BTG2P78543 158 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 FABP5Q01469 135 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 IL15RAQ13261 267 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 BIKQ13323 160 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 EBPQ15125 230 aaKnown RBP2.75□□□□□ -1.97
RFC1-216ENST00000514572 ZNF660Q6AZW8 331 aaPredicted RBP2.75□□□□□ -1.97
RFC1-216ENST00000514572 LYZL2Q7Z4W2 148 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 NATD1Q8N6N6 113 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 MORN4Q8NDC4 146 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 ZNF680Q8NEM1 530 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 CD200R1Q8TD46 325 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 ANKRD7Q92527 254 aa2.75□□□□□ -1.97
RFC1-216ENST00000514572 TMBIM1Q969X1 311 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms