RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 OR52L1Q8NGH7 329 aa0.97□□□□□ -2.25
CHD1-207ENST00000511628 OR51A2Q8NGJ7 313 aa0.97□□□□□ -2.25
CHD1-207ENST00000511628 CT55Q8WUE5 264 aa0.97□□□□□ -2.25
CHD1-207ENST00000511628 CMSS1Q9BQ75 279 aaKnown RBP0.97□□□□□ -2.25
CHD1-207ENST00000511628 GINS4Q9BRT9 223 aa0.97□□□□□ -2.25
CHD1-207ENST00000511628 ADAT1Q9BUB4 502 aaKnown RBP0.97□□□□□ -2.25
CHD1-207ENST00000511628 TRIM4Q9C037 500 aa0.97□□□□□ -2.25
CHD1-207ENST00000511628 YIPF3Q9GZM5 350 aa0.97□□□□□ -2.25
CHD1-207ENST00000511628 DOCK3Q8IZD9 2030 aa0.97□□□□□ -2.25
CHD1-207ENST00000511628 COL4A5P29400 1685 aa0.97□□□□□ -2.25
CHD1-207ENST00000511628 RP1P56715 2156 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 hCG_1818297A0A087WSY0 165 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 IGKV2-29A2NJV5 120 aaPredicted RBP0.96□□□□□ -2.26
CHD1-207ENST00000511628 A8MT66 165 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 PDE6DO43924 150 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 IFNA10P01566 189 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 SMIM17P0DL12 118 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 SRIP30626 198 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 ANP32AP39687 249 aaKnown RBP0.96□□□□□ -2.26
CHD1-207ENST00000511628 HIST1H3AP68431 136 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 H3F3AP84243 136 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 LINC01554Q52M75 96 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 ZNF826PQ6ZT77 177 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 AAED1Q7RTV5 226 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 DEFB119Q8N690 84 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 SIGLECL1Q8N7X8 197 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 OR5A1Q8NGJ0 315 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 SLC25A40Q8TBP6 338 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 SIGMAR1Q99720 223 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 SLC39A9Q9NUM3 307 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 CKLFQ9UBR5 152 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 BRWD1Q9NSI6 2320 aa0.96□□□□□ -2.26
CHD1-207ENST00000511628 PCF11O94913 1555 aaKnown RBP0.96□□□□□ -2.26
CHD1-207ENST00000511628 TMEM210A6NLX4 147 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 SERPINE1P05121 402 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 RBP1P09455 135 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 RNASE3P12724 160 aaKnown RBP0.95□□□□□ -2.26
CHD1-207ENST00000511628 SERPINB9P50453 376 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 KRTAP10-4P60372 401 aaPredicted RBP0.95□□□□□ -2.26
CHD1-207ENST00000511628 SURF2Q15527 256 aaPredicted RBP0.95□□□□□ -2.26
CHD1-207ENST00000511628 UNQ6190/PRO20217Q6UXQ8 127 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 KRT222Q8N1A0 295 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 HIST3H2BBQ8N257 126 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 WFDC5Q8TCV5 224 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 REG4Q9BYZ8 158 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 CCDC90BQ9GZT6 254 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 CYSTM1Q9H1C7 97 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 MED12LQ86YW9 2145 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 ANAPC1Q9H1A4 1944 aa0.95□□□□□ -2.26
CHD1-207ENST00000511628 INTS1Q8N201 2190 aaKnown RBP0.94□□□□□ -2.26
CHD1-207ENST00000511628 HELZ2Q9BYK8 2649 aaKnown RBP0.94□□□□□ -2.26
CHD1-207ENST00000511628 TRAV1-1A0A0B4J248 108 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 MRPS14O60783 128 aaKnown RBP0.94□□□□□ -2.26
CHD1-207ENST00000511628 OR7C1O76099 320 aaPredicted RBP0.94□□□□□ -2.26
CHD1-207ENST00000511628 C8GP07360 202 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 ASAH2BP0C7U1 165 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 CYBAP13498 195 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 HSD11B1P28845 292 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 HOXA6P31267 233 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 REEP5Q00765 189 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 KHDC3LQ587J8 217 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 C10orf55Q5SWW7 151 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 OOSP2Q86WS3 158 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 AQP3Q92482 292 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 ADAT3Q96EY9 351 aaPredicted RBP0.94□□□□□ -2.26
CHD1-207ENST00000511628 RETNLBQ9BQ08 111 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 SLC50A1Q9BRV3 221 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 OSTCQ9NRP0 149 aa0.94□□□□□ -2.26
CHD1-207ENST00000511628 NCOA1Q15788 1441 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 IGKV1-9A0A0C4DH69 117 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 A0A0D9SG52 128 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 FAM159BA6NKW6 160 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 C1orf196B1AJZ1 125 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 CLDN25C9JDP6 229 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 F8W036 122 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 OR2T1O43869 369 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 OR5F1O95221 314 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 CST2P09228 141 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 CAPZBP47756 277 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 RHEBQ15382 184 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 Q6Q795 121 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 DPPA3Q6W0C5 159 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 LCA10Q71F78 164 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 DEFB128Q7Z7B8 93 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 OR4E2Q8NGC2 313 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 C10orf105Q8TEF2 133 aa0.93□□□□□ -2.26
CHD1-207ENST00000511628 KMT2BQ9UMN6 2715 aaPredicted RBP0.92□□□□□ -2.26
CHD1-207ENST00000511628 TRAV14DV4A0A0A6YYC5 116 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 TRAV3A0A0B4J244 114 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 IGKV3D-7A0A0C4DH55 119 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 IGKV3OR2-268A0A0C4DH90 116 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 C2orf70A6NJV1 201 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 HCRTO43612 131 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 ATP5HO75947 161 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 SERPINA1P01009 418 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 COX6A1P12074 109 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 PPIBP23284 216 aaKnown RBP0.92□□□□□ -2.26
CHD1-207ENST00000511628 CASP1P29466 404 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 RNASE10Q5GAN6 216 aaKnown RBP0.92□□□□□ -2.26
CHD1-207ENST00000511628 OR4D11Q8NGI4 311 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms