RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CDC42EP3Q9UKI2 254 aa12.27□□□□□ -0.45
USP38-202ENST00000510377 M0QZ24 198 aa12.27□□□□□ -0.45
USP38-202ENST00000510377 YPEL1O60688 119 aa12.27□□□□□ -0.45
USP38-202ENST00000510377 GPX1P07203 203 aa12.27□□□□□ -0.45
USP38-202ENST00000510377 SAA1P0DJI8 122 aaPredicted RBP12.27□□□□□ -0.45
USP38-202ENST00000510377 CCL3L1P16619 93 aa12.27□□□□□ -0.45
USP38-202ENST00000510377 ERVK11-1P61568 191 aa12.27□□□□□ -0.45
USP38-202ENST00000510377 C19orf35Q6ZS72 473 aa12.27□□□□□ -0.45
USP38-202ENST00000510377 LINC00305Q7Z4B0 112 aa12.27□□□□□ -0.45
USP38-202ENST00000510377 RBM14Q96PK6 669 aaKnown RBP12.27□□□□□ -0.45
USP38-202ENST00000510377 YPEL2Q96QA6 119 aa12.27□□□□□ -0.45
USP38-202ENST00000510377 TRBV20OR9-2A0A075B6H5 130 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 LGALS4P56470 323 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 TBR1Q16650 682 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 GNB1LQ9BYB4 327 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 KBTBD11-OT1A0A1B0GTJ5 212 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 PEX7O00628 323 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 CRYABP02511 175 aaKnown RBP12.26□□□□□ -0.45
USP38-202ENST00000510377 KRTAP27-1Q3LI81 207 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 Q6ZR03 302 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 RAB1CQ92928 201 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 MRPL20Q9BYC9 149 aaKnown RBP12.26□□□□□ -0.45
USP38-202ENST00000510377 PRO3102Q9H379 93 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 BTF3P20290 206 aaKnown RBP12.26□□□□□ -0.45
USP38-202ENST00000510377 COA6Q5JTJ3 125 aaKnown RBP12.26□□□□□ -0.45
USP38-202ENST00000510377 MCRIP2Q9BUT9 160 aaKnown RBP12.26□□□□□ -0.45
USP38-202ENST00000510377 SFXN3Q9BWM7 321 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 NUDT3O95989 172 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 RPL15P61313 204 aaKnown RBP12.26□□□□□ -0.45
USP38-202ENST00000510377 COTL1Q14019 142 aa12.26□□□□□ -0.45
USP38-202ENST00000510377 HYPMO75409 117 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 FCER1GP30273 86 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 C1orf174Q8IYL3 243 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 MUC15Q8N387 334 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 OSTCQ9NRP0 149 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 IGKV1D-17A0A075B6S4 117 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 MUC21A0A0G2JKD1 596 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 MUC21A0A140T8X8 626 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 OR4C46A6NHA9 309 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 MUC21Q5SSG8 566 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 IZUMO1RA6ND01 250 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 DAZAP2Q15038 168 aaPredicted RBP12.25□□□□□ -0.45
USP38-202ENST00000510377 Q6ZVH6 145 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 C5orf30Q96GV9 206 aa12.25□□□□□ -0.45
USP38-202ENST00000510377 COL8A2P25067 703 aa12.24□□□□□ -0.45
USP38-202ENST00000510377 ZNF714Q96N38 554 aa12.24□□□□□ -0.45
USP38-202ENST00000510377 IGHV1-18A0A0C4DH31 117 aa12.24□□□□□ -0.45
USP38-202ENST00000510377 ARL3P36405 182 aa12.24□□□□□ -0.45
USP38-202ENST00000510377 CSN1S1P47710 185 aa12.24□□□□□ -0.45
USP38-202ENST00000510377 TMEM108Q6UXF1 575 aa12.24□□□□□ -0.45
USP38-202ENST00000510377 TRAV9-1A0A075B6T8 112 aa12.24□□□□□ -0.45
USP38-202ENST00000510377 K7EN84 100 aa12.24□□□□□ -0.45
USP38-202ENST00000510377 IGKV1-16P04430 117 aa12.24□□□□□ -0.45
USP38-202ENST00000510377 TMEM70Q9BUB7 260 aa12.24□□□□□ -0.45
USP38-202ENST00000510377 UPK2O00526 184 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 GOLT1AQ6ZVE7 132 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 OR4F17Q8NGA8 305 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 RPEQ96AT9 228 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 RCHY1Q96PM5 261 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 A0A1W2PS18 150 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 ZNF134P52741 427 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 CX3CL1P78423 397 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 FAM27E3Q08E93 113 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 SRSF6Q13247 344 aaKnown RBP12.23□□□□□ -0.45
USP38-202ENST00000510377 SLC25A34Q6PIV7 304 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 DUX4L9Q6RFH8 374 aaPredicted RBP12.23□□□□□ -0.45
USP38-202ENST00000510377 SRSF12Q8WXF0 261 aaKnown RBP12.23□□□□□ -0.45
USP38-202ENST00000510377 S4R3C0 116 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 CPAMD8Q8IZJ3 1885 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 LRP4O75096 1905 aa12.23□□□□□ -0.45
USP38-202ENST00000510377 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.22□□□□□ -0.45
USP38-202ENST00000510377 SRRM5B3KS81 715 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 NBEAP1P0C6P0 100 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 CD24P25063 80 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 S100A7P31151 101 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 PRR7Q8TB68 274 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 SNRNP40Q96DI7 357 aaKnown RBP12.22□□□□□ -0.45
USP38-202ENST00000510377 HIF1ANQ9NWT6 349 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 CHD8Q9HCK8 2581 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 RPL27AP46776 148 aaKnown RBP12.22□□□□□ -0.45
USP38-202ENST00000510377 INSIG2Q9Y5U4 225 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 VCANP13611 3396 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 TEX50A0A1B0GTY4 177 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 SH2D7A6NKC9 451 aaPredicted RBP12.22□□□□□ -0.45
USP38-202ENST00000510377 C9JCJ5 164 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 AREGP15514 252 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 KIR2DL2P43627 348 aaPredicted RBP12.22□□□□□ -0.45
USP38-202ENST00000510377 VDAC2P45880 294 aaPredicted RBP12.22□□□□□ -0.45
USP38-202ENST00000510377 HBBP68871 147 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 SCGB2A2Q13296 93 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 SS18L1O75177 396 aaPredicted RBP12.22□□□□□ -0.45
USP38-202ENST00000510377 YPEL3P61236 119 aaPredicted RBP12.22□□□□□ -0.45
USP38-202ENST00000510377 NUDT10Q8NFP7 164 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 OR52E5Q8NH55 327 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 NUDT11Q96G61 164 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 GRAMD2BQ96HH9 432 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 RASL11BQ9BPW5 248 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 C20orf144Q9BQM9 153 aa12.22□□□□□ -0.45
USP38-202ENST00000510377 PLXNB1O43157 2135 aa12.21□□□□□ -0.45
USP38-202ENST00000510377 CD69Q07108 199 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms