RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TAGLN2P37802 199 aaKnown RBP9.73□□□□□ -0.85
LIN54-206ENST00000506560 RPL29P47914 159 aaKnown RBP9.73□□□□□ -0.85
LIN54-206ENST00000506560 HES1Q14469 280 aa9.73□□□□□ -0.85
LIN54-206ENST00000506560 PLGLAQ15195 96 aa9.73□□□□□ -0.85
LIN54-206ENST00000506560 FAM78BQ5VT40 261 aa9.73□□□□□ -0.85
LIN54-206ENST00000506560 SPNS3Q6ZMD2 512 aa9.73□□□□□ -0.85
LIN54-206ENST00000506560 MMD2Q8IY49 270 aa9.73□□□□□ -0.85
LIN54-206ENST00000506560 DERL1Q9BUN8 251 aa9.73□□□□□ -0.85
LIN54-206ENST00000506560 ANKRD17O75179 2603 aaKnown RBP9.72□□□□□ -0.85
LIN54-206ENST00000506560 SNRPCP09234 159 aaKnown RBP9.72□□□□□ -0.85
LIN54-206ENST00000506560 RHEBQ15382 184 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 SRSF12Q8WXF0 261 aaKnown RBP9.72□□□□□ -0.85
LIN54-206ENST00000506560 TMEM37Q8WXS4 190 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 TBX15Q96SF7 602 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 SSX3Q99909 188 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 NIPSNAP3BQ9BS92 247 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 AURKAIP1Q9NWT8 199 aaPredicted RBP9.72□□□□□ -0.85
LIN54-206ENST00000506560 CHD6Q8TD26 2715 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 IGHV3OR16-10A0A075B7F0 116 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 A1L4Q6 167 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 INS-IGF2F8WCM5 200 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 MOSP00540 346 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 PSMB3P49720 205 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 RND2P52198 227 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 CST9LP1Q5W188 147 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 EAF1Q96JC9 268 aaPredicted RBP9.72□□□□□ -0.85
LIN54-206ENST00000506560 SLC25A33Q9BSK2 321 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 URGCP-MRPS24S4R325 110 aa9.72□□□□□ -0.85
LIN54-206ENST00000506560 NBPF19A0A087WUL8 3843 aa9.71□□□□□ -0.85
LIN54-206ENST00000506560 TRAV5A0A0B4J249 113 aa9.71□□□□□ -0.85
LIN54-206ENST00000506560 IGHV4-61A0A0C4DH41 118 aa9.71□□□□□ -0.85
LIN54-206ENST00000506560 IGHV2-70DA0A0C4DH43 119 aa9.71□□□□□ -0.85
LIN54-206ENST00000506560 C11orf94C9JXX5 98 aa9.71□□□□□ -0.85
LIN54-206ENST00000506560 CLN5O75503 358 aa9.71□□□□□ -0.85
LIN54-206ENST00000506560 OR2C1O95371 312 aa9.71□□□□□ -0.85
LIN54-206ENST00000506560 ZNF843Q8N446 348 aa9.71□□□□□ -0.85
LIN54-206ENST00000506560 ZNF503Q96F45 646 aa9.71□□□□□ -0.85
LIN54-206ENST00000506560 UHRF2Q96PU4 802 aa9.71□□□□□ -0.85
LIN54-206ENST00000506560 CCL19Q99731 98 aa9.71□□□□□ -0.85
LIN54-206ENST00000506560 YTHDF2Q9Y5A9 579 aaKnown RBP9.71□□□□□ -0.85
LIN54-206ENST00000506560 IFNA1P01562 189 aa9.71□□□□□ -0.86
LIN54-206ENST00000506560 FAM120AOSQ5T036 256 aa9.71□□□□□ -0.86
LIN54-206ENST00000506560 TVP23CQ96ET8 276 aa9.71□□□□□ -0.86
LIN54-206ENST00000506560 AJUBAQ96IF1 538 aa9.71□□□□□ -0.86
LIN54-206ENST00000506560 PARLQ9H300 379 aa9.71□□□□□ -0.86
LIN54-206ENST00000506560 PGPEP1LA6NFU8 196 aa9.7□□□□□ -0.86
LIN54-206ENST00000506560 TOX4O94842 621 aa9.7□□□□□ -0.86
LIN54-206ENST00000506560 KLF17Q5JT82 389 aaPredicted RBP9.7□□□□□ -0.86
LIN54-206ENST00000506560 YPEL4Q96NS1 127 aa9.7□□□□□ -0.86
LIN54-206ENST00000506560 SMIM7Q9BQ49 75 aa9.7□□□□□ -0.86
LIN54-206ENST00000506560 S4R3C0 116 aa9.7□□□□□ -0.86
LIN54-206ENST00000506560 NDPQ00604 133 aa9.7□□□□□ -0.86
LIN54-206ENST00000506560 RAB31Q13636 194 aa9.7□□□□□ -0.86
LIN54-206ENST00000506560 SLC35E1Q96K37 410 aa9.7□□□□□ -0.86
LIN54-206ENST00000506560 UNKLQ9H9P5 680 aaKnown RBP9.7□□□□□ -0.86
LIN54-206ENST00000506560 SDF2L1Q9HCN8 221 aa9.7□□□□□ -0.86
LIN54-206ENST00000506560 TRAV20A0A0B4J274 112 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 FNDC10F2Z333 226 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 AP4M1O00189 453 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 OR10J4P0C629 311 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 GCHFRP30047 84 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 PMS2P11Q13670 270 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 OR5T1Q8NG75 326 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 PSMB11A5LHX3 300 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 NBR2O15453 112 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 CNIH1O95406 144 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 RPS10P46783 165 aaKnown RBP9.69□□□□□ -0.86
LIN54-206ENST00000506560 PATE2Q6UY27 113 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 PIP4P2Q8N4L2 257 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 MALSU1Q96EH3 234 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 PERPQ96FX8 193 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 MANBALQ9NQG1 85 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 IGHV4-30-2A0A087WSY4 118 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 RHOBP62745 196 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 CYP2G1PQ6ZSU1 146 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 CACNG8Q8WXS5 425 aa9.69□□□□□ -0.86
LIN54-206ENST00000506560 SOX21Q9Y651 276 aaPredicted RBP9.69□□□□□ -0.86
LIN54-206ENST00000506560 SCO2A0A1W2PP80 73 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 NDUFB4O95168 129 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 CXorf1O96002 111 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 MT-CO2P00403 227 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 COL8A1P27658 744 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 GPX4P36969 197 aaPredicted RBP9.68□□□□□ -0.86
LIN54-206ENST00000506560 ADIRFQ15847 76 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 ZNF114Q8NC26 417 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 RNASEH2CQ8TDP1 164 aaKnown RBP9.68□□□□□ -0.86
LIN54-206ENST00000506560 SH2D7A6NKC9 451 aaPredicted RBP9.68□□□□□ -0.86
LIN54-206ENST00000506560 NCBP2LA6PVI3 153 aaKnown RBP9.68□□□□□ -0.86
LIN54-206ENST00000506560 CXCL1P09341 107 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 SAA4P35542 130 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 CEACAM3P40198 252 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 ATP5J2P56134 94 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 FAM209BQ5JX69 171 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 C1orf122Q6ZSJ8 110 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 FUT9Q9Y231 359 aa9.68□□□□□ -0.86
LIN54-206ENST00000506560 F11RQ9Y624 299 aaKnown RBP9.68□□□□□ -0.86
LIN54-206ENST00000506560 DOPEY2Q9Y3R5 2298 aa9.67□□□□□ -0.86
LIN54-206ENST00000506560 TRBV20OR9-2A0A075B6H5 130 aa9.67□□□□□ -0.86
LIN54-206ENST00000506560 RD3LP0DJH9 198 aa9.67□□□□□ -0.86
LIN54-206ENST00000506560 PDLIM4P50479 330 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms