RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 SLC35E3Q7Z769 313 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 MRPL41Q8IXM3 137 aaKnown RBP5.67□□□□□ -1.5
NUP54-204ENST00000506098 TTC9CQ8N5M4 171 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 OR2C3Q8N628 320 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 ZNF114Q8NC26 417 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 OR10W1Q8NGF6 305 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 OR2T35Q8NGX2 323 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 DUX5Q96PT3 197 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 MAGT1Q9H0U3 335 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 C16orf95Q9H693 158 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 TNFRSF19Q9NS68 423 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 LSM5Q9Y4Y9 91 aaKnown RBP5.67□□□□□ -1.5
NUP54-204ENST00000506098 WSB1Q9Y6I7 421 aa5.67□□□□□ -1.5
NUP54-204ENST00000506098 SH2D7A6NKC9 451 aaPredicted RBP5.66□□□□□ -1.5
NUP54-204ENST00000506098 NPIPB5A8MRT5 1133 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 HMSDA8MTL9 139 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 CEBPZOSA8MTT3 80 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 C1orf196B1AJZ1 125 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 E5RGE8 158 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 AP4M1O00189 453 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 NXPH3O95157 252 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 NDUFA7O95182 113 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 BRI3O95415 125 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 TMEM50AO95807 157 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 PPIFP30405 207 aaKnown RBP5.66□□□□□ -1.5
NUP54-204ENST00000506098 P2RY1P47900 373 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 GNB1P62873 340 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 ERHP84090 104 aaKnown RBP5.66□□□□□ -1.5
NUP54-204ENST00000506098 WT1-ASQ06250 92 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 TMEM267Q0VDI3 215 aaPredicted RBP5.66□□□□□ -1.5
NUP54-204ENST00000506098 C2orf83Q53S99 150 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 Q6ZSV7 163 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 SVBPQ8N300 66 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 LFNGQ8NES3 379 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 THAP6Q8TBB0 222 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 FAM103A1Q9BTL3 118 aaKnown RBP5.66□□□□□ -1.5
NUP54-204ENST00000506098 NDUFAF3Q9BU61 184 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 HIPK2Q9H2X6 1198 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 PLEKHA3Q9HB20 300 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 ENY2Q9NPA8 101 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 HEYLQ9NQ87 328 aaPredicted RBP5.66□□□□□ -1.5
NUP54-204ENST00000506098 OR5AC2Q9NZP5 309 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 NAGKQ9UJ70 344 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 WNK1Q9H4A3 2382 aa5.66□□□□□ -1.5
NUP54-204ENST00000506098 ELOA3CA0A087WX78 387 aaPredicted RBP5.65□□□□□ -1.5
NUP54-204ENST00000506098 TRAV41A0A0B4J266 112 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 TMEM218A2RU14 115 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 C15orf62A8K5M9 175 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 PMS2P5A8MQ11 134 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 SSSCA1O60232 199 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 CRYBA1P05813 215 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 OR13C7P0DN81 318 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 RNASE2P10153 161 aaKnown RBP5.65□□□□□ -1.5
NUP54-204ENST00000506098 IAPPP10997 89 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 AREGP15514 252 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 TAGLN2P37802 199 aaKnown RBP5.65□□□□□ -1.5
NUP54-204ENST00000506098 RPS20P60866 119 aaKnown RBP5.65□□□□□ -1.5
NUP54-204ENST00000506098 S100A10P60903 97 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 RPL23AP62750 156 aaKnown RBP5.65□□□□□ -1.5
NUP54-204ENST00000506098 CFHR3Q02985 330 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 LRRC37A5PQ49AS3 106 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 SPINK9Q5DT21 86 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 C9orf152Q5JTZ5 239 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 UNQ5815/PRO19632Q6UWF5 114 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 TMEM14EPQ6UXP3 125 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 OR11H4Q8NGC9 324 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 OR1L6Q8NGR2 347 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 OR1P1Q8NH06 330 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 FAM110DQ8TAY7 271 aaPredicted RBP5.65□□□□□ -1.5
NUP54-204ENST00000506098 TMEM170AQ8WVE7 144 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 P2RX4Q99571 388 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 HINT2Q9BX68 163 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 PARP11Q9NR21 331 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 LYRM2Q9NU23 88 aaPredicted RBP5.65□□□□□ -1.5
NUP54-204ENST00000506098 SERTAD4Q9NUC0 356 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 PSENENQ9NZ42 101 aa5.65□□□□□ -1.5
NUP54-204ENST00000506098 F11RQ9Y624 299 aaKnown RBP5.65□□□□□ -1.5
NUP54-204ENST00000506098 JMJD1CQ15652 2540 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 TRBV9A0A0B4J1U6 114 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 TMEM89A2RUT3 159 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 PRSS46E5RG02 174 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 G3V318 75 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 SMLR1H3BR10 107 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 H3BUA1 57 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 FBXO24O75426 580 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 IGLV1-40P01703 118 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 NBEAP1P0C6P0 100 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 SPP1P10451 314 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 SCGB1A1P11684 91 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 NPY1RP25929 384 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 SNCAP37840 140 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 CDC34P49427 236 aaPredicted RBP5.64□□□□□ -1.51
NUP54-204ENST00000506098 SUB1P53999 127 aaKnown RBP eCLIP5.64□□□□□ -1.51
NUP54-204ENST00000506098 MFAP2P55001 183 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 PSG3Q16557 428 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 ZNF546Q86UE3 836 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 TMEM252Q8N6L7 170 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 C15orf54Q8N8G6 183 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 HSD17B11Q8NBQ5 300 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 WIPF2Q8TF74 440 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms