RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ATP6V1FQ16864 119 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 CLLU1Q5K131 121 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 BAP18Q8IXM2 172 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 PUSL1Q8N0Z8 303 aaKnown RBP3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR8H3Q8N146 312 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 LRRC75A-AS1Q8N1F1 130 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 TMEM252Q8N6L7 170 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR4C13Q8NGP0 309 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR4A16Q8NH70 328 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 CLDND2Q8NHS1 167 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 C10orf105Q8TEF2 133 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 LEAP2Q969E1 77 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 LHX4Q969G2 390 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 FLYWCH2Q96CP2 140 aaKnown RBP3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 MRPL20Q9BYC9 149 aaKnown RBP3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 BPESC1Q9GZL8 116 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 ARV1Q9H2C2 271 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 TMEM14BQ9NUH8 114 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 MED9Q9NWA0 146 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 DPM3Q9P2X0 92 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 ONECUT1Q9UBC0 465 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 FBXL17Q9UF56 701 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 FOXA2Q9Y261 457 aaPredicted RBP3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 ZNF257Q9Y2Q1 563 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 TBL2Q9Y4P3 447 aaKnown RBP3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 RELNP78509 3460 aa3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 SMG1Q96Q15 3661 aaKnown RBP3.82□□□□□ -1.8
DEPDC1B-203ENST00000505017 MED13LQ71F56 2210 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 A0A1W2PPE3 182 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 LINC00862A6NCI5 91 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 CEBPZOSA8MTT3 80 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 ODF3BA8MYP8 253 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 INS-IGF2F8WCM5 200 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 LY6LH3BQJ8 138 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 BUB1B-PAK6H3BSN5 160 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 UPK2O00526 184 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 KBTBD11O94819 623 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 ARG1P05089 322 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR8U8P0C7N1 319 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 SEC11BP0C7V7 166 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 HTR1DP28221 377 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 CD1BP29016 333 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 MAS1LP35410 378 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 HTR2BP41595 481 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 RAB5CP51148 216 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 PAX9P55771 341 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 HSPE1P61604 102 aaKnown RBP3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 VMA21Q3ZAQ7 101 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR2B11Q5JQS5 317 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR4A47Q6IF82 309 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 TMEM14EPQ6UXP3 125 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 ZNF525Q8N782 197 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 Q8N7P7 452 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR4P4Q8NGL7 312 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR1S2Q8NGQ3 325 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR5B3Q8NH48 314 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 TMEM167AQ8TBQ9 72 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 DTD1Q8TEA8 209 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 RPEQ96AT9 228 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 PINX1Q96BK5 328 aaKnown RBP3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 GNPNAT1Q96EK6 184 aaPredicted RBP3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 SAT2Q96F10 170 aaPredicted RBP3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 TSNAXQ99598 290 aaKnown RBP3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 GGACTQ9BVM4 153 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 PARD6GQ9BYG4 376 aaPredicted RBP3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 SIRPDQ9H106 197 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 RBKSQ9H477 322 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 LPAR2Q9HBW0 351 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 CYTL1Q9NRR1 136 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 PSENENQ9NZ42 101 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 STRAPQ9Y3F4 350 aaKnown RBP3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 INSIG2Q9Y5U4 225 aa3.81□□□□□ -1.8
DEPDC1B-203ENST00000505017 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.81□□□□□ -1.82e-14■■■■□ 20.7
DEPDC1B-203ENST00000505017 ARHGAP32A7KAX9 2087 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 USP9YO00507 2555 aaPredicted RBP3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 PTPN13Q12923 2485 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 IGHV1-3A0A0C4DH29 117 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 A0A1W2PN81 502 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 IGSF23A1L1A6 192 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 FAM24AA6NFZ4 105 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 UMAD1C9J7I0 102 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 FNDC10F2Z333 226 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 H7C2Y5 167 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 TRIM77I1YAP6 450 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 TMEM50AO95807 157 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 CFDP00746 253 aaPredicted RBP3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 IFNA5P01569 189 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 IFNA17P01571 189 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 IGHV3-7P01780 117 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 NMBP08949 121 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR9G9P0C7N8 305 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 S100A1P23297 94 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 CHRNA7P36544 502 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 UBE2E1P51965 193 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 ARF6P62330 175 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 RAB11AP62491 216 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 RPL8P62917 257 aaKnown RBP3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 PAX8Q06710 450 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 UTF1Q5T230 341 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 TPTE2P1Q5T6R2 138 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms