RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 TMPRSS5Q9H3S3 457 aa17.47■□□□□ 0.39
PTPN13-205ENST00000502971 WNK2Q9Y3S1 2297 aa17.47■□□□□ 0.39
PTPN13-205ENST00000502971 CTRB1P17538 263 aa17.47■□□□□ 0.39
PTPN13-205ENST00000502971 GATA3P23771 443 aa17.47■□□□□ 0.39
PTPN13-205ENST00000502971 FAM120AOSQ5T036 256 aa17.47■□□□□ 0.39
PTPN13-205ENST00000502971 CTRB2Q6GPI1 263 aa17.47■□□□□ 0.39
PTPN13-205ENST00000502971 APCP25054 2843 aa17.46■□□□□ 0.39
PTPN13-205ENST00000502971 CXorf1O96002 111 aa17.46■□□□□ 0.39
PTPN13-205ENST00000502971 CX3CL1P78423 397 aa17.46■□□□□ 0.39
PTPN13-205ENST00000502971 ARPC1AQ92747 370 aa17.46■□□□□ 0.39
PTPN13-205ENST00000502971 SLC25A33Q9BSK2 321 aa17.46■□□□□ 0.39
PTPN13-205ENST00000502971 WNT10AQ9GZT5 417 aa17.46■□□□□ 0.39
PTPN13-205ENST00000502971 PLXNB1O43157 2135 aa17.46■□□□□ 0.38
PTPN13-205ENST00000502971 TRAV20A0A0B4J274 112 aa17.45■□□□□ 0.38
PTPN13-205ENST00000502971 TCRBV4S1A1TA0A5B7 111 aa17.45■□□□□ 0.38
PTPN13-205ENST00000502971 NPBWR1P48145 328 aa17.45■□□□□ 0.38
PTPN13-205ENST00000502971 RND2P52198 227 aa17.45■□□□□ 0.38
PTPN13-205ENST00000502971 SELENOTP62341 195 aa17.45■□□□□ 0.38
PTPN13-205ENST00000502971 CYB561D1Q8N8Q1 229 aa17.45■□□□□ 0.38
PTPN13-205ENST00000502971 Q8N9W7 124 aa17.45■□□□□ 0.38
PTPN13-205ENST00000502971 TMEM116Q8NCL8 245 aa17.45■□□□□ 0.38
PTPN13-205ENST00000502971 C7orf69Q9H7B7 122 aa17.45■□□□□ 0.38
PTPN13-205ENST00000502971 MED13LQ71F56 2210 aa17.45■□□□□ 0.38
PTPN13-205ENST00000502971 MT-CO2P00403 227 aa17.44■□□□□ 0.38
PTPN13-205ENST00000502971 FBP1P09467 338 aa17.44■□□□□ 0.38
PTPN13-205ENST00000502971 C19orf35Q6ZS72 473 aa17.44■□□□□ 0.38
PTPN13-205ENST00000502971 IQCF2Q8IXL9 164 aa17.44■□□□□ 0.38
PTPN13-205ENST00000502971 NANPQ8TBE9 248 aa17.44■□□□□ 0.38
PTPN13-205ENST00000502971 MRPL36Q9P0J6 103 aaKnown RBP17.44■□□□□ 0.38
PTPN13-205ENST00000502971 DMRT1Q9Y5R6 373 aa17.44■□□□□ 0.38
PTPN13-205ENST00000502971 NAV2Q8IVL1 2488 aa17.44■□□□□ 0.38
PTPN13-205ENST00000502971 UNC79Q9P2D8 2635 aa17.44■□□□□ 0.38
PTPN13-205ENST00000502971 IGKV1D-37A0A075B6S9 117 aa17.44■□□□□ 0.38
PTPN13-205ENST00000502971 TRAV40A0A0B4J280 105 aa17.44■□□□□ 0.38
PTPN13-205ENST00000502971 MEF2BQ02080 365 aaPredicted RBP17.44■□□□□ 0.38
PTPN13-205ENST00000502971 RUSC1-AS1Q66K80 236 aa17.44■□□□□ 0.38
PTPN13-205ENST00000502971 SEPSECSQ9HD40 501 aaKnown RBP17.44■□□□□ 0.38
PTPN13-205ENST00000502971 FUT9Q9Y231 359 aa17.44■□□□□ 0.38
PTPN13-205ENST00000502971 ANKRD17O75179 2603 aaKnown RBP17.43■□□□□ 0.38
PTPN13-205ENST00000502971 ABCA2Q9BZC7 2435 aa17.43■□□□□ 0.38
PTPN13-205ENST00000502971 A0A096LNT2 108 aa17.43■□□□□ 0.38
PTPN13-205ENST00000502971 NPIPB5A8MRT5 1133 aa17.43■□□□□ 0.38
PTPN13-205ENST00000502971 DNASE2O00115 360 aaPredicted RBP17.43■□□□□ 0.38
PTPN13-205ENST00000502971 GATA2P23769 480 aaPredicted RBP17.43■□□□□ 0.38
PTPN13-205ENST00000502971 RNF2Q99496 336 aa17.43■□□□□ 0.38
PTPN13-205ENST00000502971 TRGV9Q99603 122 aa17.43■□□□□ 0.38
PTPN13-205ENST00000502971 RASL11BQ9BPW5 248 aa17.43■□□□□ 0.38
PTPN13-205ENST00000502971 MEGF9Q9H1U4 602 aa17.43■□□□□ 0.38
PTPN13-205ENST00000502971 HIF1ANQ9NWT6 349 aa17.43■□□□□ 0.38
PTPN13-205ENST00000502971 NAV3Q8IVL0 2385 aa17.43■□□□□ 0.38
PTPN13-205ENST00000502971 IGHV3-48P01763 117 aa17.42■□□□□ 0.38
PTPN13-205ENST00000502971 HLA-DRB1P01911 266 aa17.42■□□□□ 0.38
PTPN13-205ENST00000502971 ARL14EPLP0DKL9 152 aa17.42■□□□□ 0.38
PTPN13-205ENST00000502971 FAM78BQ5VT40 261 aa17.42■□□□□ 0.38
PTPN13-205ENST00000502971 SPNS3Q6ZMD2 512 aa17.42■□□□□ 0.38
PTPN13-205ENST00000502971 LINC01356Q8N9X3 169 aa17.42■□□□□ 0.38
PTPN13-205ENST00000502971 FAM103A1Q9BTL3 118 aaKnown RBP17.42■□□□□ 0.38
PTPN13-205ENST00000502971 IGHV3OR16-10A0A075B7F0 116 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 I3L2K1 104 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 OR5G3P0C626 314 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 CEBPGP53567 150 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 CD81P60033 236 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 PRSS57Q6UWY2 283 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 TTC9CQ8N5M4 171 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 SUN5Q8TC36 379 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 GATAD1Q8WUU5 269 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 TNFRSF19Q9NS68 423 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 POLQO75417 2590 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 SETXQ7Z333 2677 aaKnown RBP17.41■□□□□ 0.38
PTPN13-205ENST00000502971 IGHV7-81A0A0B4J1V7 117 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 SPATA31B1PQ5VZV4 182 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.41■□□□□ 0.38
PTPN13-205ENST00000502971 OR1L4Q8NGR5 311 aa17.41■□□□□ 0.38
PTPN13-205ENST00000502971 MRPL32Q9BYC8 188 aaKnown RBP17.41■□□□□ 0.38
PTPN13-205ENST00000502971 CSMD2Q7Z408 3487 aa17.4■□□□□ 0.38
PTPN13-205ENST00000502971 PAGE4O60829 102 aa17.4■□□□□ 0.38
PTPN13-205ENST00000502971 LOXL1Q08397 574 aaPredicted RBP17.4■□□□□ 0.38
PTPN13-205ENST00000502971 ASPHD1Q5U4P2 390 aa17.4■□□□□ 0.38
PTPN13-205ENST00000502971 FAM90A2PQ658T7 463 aa17.4■□□□□ 0.38
PTPN13-205ENST00000502971 BRD3OSQ6XYD6 125 aa17.4■□□□□ 0.38
PTPN13-205ENST00000502971 PFDN5Q99471 154 aa17.4■□□□□ 0.38
PTPN13-205ENST00000502971 TECRQ9NZ01 308 aaKnown RBP17.4■□□□□ 0.38
PTPN13-205ENST00000502971 PSMB11A5LHX3 300 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 FAM74A7A6NL05 159 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 TMEM250H0YL14 139 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 M0R036 132 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 IGHV4-38-2P0DP08 117 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 GCHFRP30047 84 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 TAS2R45P59539 299 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 NDPQ00604 133 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 ZNF90Q03938 601 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 FAM74A3Q4VXF1 159 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 MIR17HGQ75NE6 70 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 OR4X1Q8NH49 305 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 TXNDC17Q9BRA2 123 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 DNAJC4Q9NNZ3 241 aa17.39■□□□□ 0.37
PTPN13-205ENST00000502971 PUS1Q9Y606 427 aaKnown RBP eCLIP17.39■□□□□ 0.37
PTPN13-205ENST00000502971 AWAT1Q58HT5 328 aa17.38■□□□□ 0.37
PTPN13-205ENST00000502971 TMEM37Q8WXS4 190 aa17.38■□□□□ 0.37
PTPN13-205ENST00000502971 NIPSNAP3BQ9BS92 247 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms