RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 OR5AP2Q8NGF4 316 aa8.3□□□□□ -1.08
CDK9-205ENST00000498339 IFT46Q9NQC8 304 aa8.3□□□□□ -1.08
CDK9-205ENST00000498339 RFNGQ9Y644 331 aa8.3□□□□□ -1.08
CDK9-205ENST00000498339 MEIS3P1A6NDR6 274 aa8.29□□□□□ -1.08
CDK9-205ENST00000498339 IGKV3-20P01619 116 aa8.29□□□□□ -1.08
CDK9-205ENST00000498339 SNCAP37840 140 aa8.29□□□□□ -1.08
CDK9-205ENST00000498339 FXYD7P58549 80 aa8.29□□□□□ -1.08
CDK9-205ENST00000498339 PRCDQ00LT1 54 aa8.29□□□□□ -1.08
CDK9-205ENST00000498339 OGFRL1Q5TC84 451 aaPredicted RBP8.29□□□□□ -1.08
CDK9-205ENST00000498339 H2BFWTQ7Z2G1 175 aa8.29□□□□□ -1.08
CDK9-205ENST00000498339 SPATA12Q7Z6I5 190 aa8.29□□□□□ -1.08
CDK9-205ENST00000498339 ZNF2Q9BSG1 426 aaPredicted RBP8.29□□□□□ -1.08
CDK9-205ENST00000498339 YTHDF1Q9BYJ9 559 aaKnown RBP8.29□□□□□ -1.08
CDK9-205ENST00000498339 NDUFB11Q9NX14 153 aa8.29□□□□□ -1.08
CDK9-205ENST00000498339 DKK2Q9UBU2 259 aa8.29□□□□□ -1.08
CDK9-205ENST00000498339 NBDYA0A0U1RRE5 68 aa8.28□□□□□ -1.08
CDK9-205ENST00000498339 TRDV1A0A1B0GX56 115 aa8.28□□□□□ -1.08
CDK9-205ENST00000498339 TMEM50AO95807 157 aa8.28□□□□□ -1.08
CDK9-205ENST00000498339 CRYBB3P26998 211 aa8.28□□□□□ -1.08
CDK9-205ENST00000498339 FAM3BP58499 235 aaPredicted RBP8.28□□□□□ -1.08
CDK9-205ENST00000498339 PHLDA2Q53GA4 152 aa8.28□□□□□ -1.08
CDK9-205ENST00000498339 PRSS48Q7RTY5 328 aa8.28□□□□□ -1.08
CDK9-205ENST00000498339 SLC35G3Q8N808 338 aa8.28□□□□□ -1.08
CDK9-205ENST00000498339 C15orf53Q8NAA6 179 aa8.28□□□□□ -1.08
CDK9-205ENST00000498339 DUSP21Q9H596 190 aa8.28□□□□□ -1.08
CDK9-205ENST00000498339 RRP15Q9Y3B9 282 aaKnown RBP8.28□□□□□ -1.08
CDK9-205ENST00000498339 SMIM9A6NGZ8 99 aa8.27□□□□□ -1.09
CDK9-205ENST00000498339 EPM2AB3EWF7 344 aa8.27□□□□□ -1.09
CDK9-205ENST00000498339 H3BMM0 161 aa8.27□□□□□ -1.09
CDK9-205ENST00000498339 CORTO00230 105 aa8.27□□□□□ -1.09
CDK9-205ENST00000498339 GPR31O00270 319 aa8.27□□□□□ -1.09
CDK9-205ENST00000498339 S100GP29377 79 aa8.27□□□□□ -1.09
CDK9-205ENST00000498339 OPRK1P41145 380 aa8.27□□□□□ -1.09
CDK9-205ENST00000498339 CBX5P45973 191 aa8.27□□□□□ -1.09
CDK9-205ENST00000498339 DAD1P61803 113 aa8.27□□□□□ -1.09
CDK9-205ENST00000498339 ZNF705AQ6ZN79 300 aaPredicted RBP8.27□□□□□ -1.09
CDK9-205ENST00000498339 CADM3Q8N126 398 aa8.27□□□□□ -1.09
CDK9-205ENST00000498339 NEU1Q99519 415 aa8.27□□□□□ -1.09
CDK9-205ENST00000498339 ZNF705FA8MVS1 300 aaPredicted RBP8.26□□□□□ -1.09
CDK9-205ENST00000498339 FAM90A26D6RGX4 464 aa8.26□□□□□ -1.09
CDK9-205ENST00000498339 PMP2P02689 132 aa8.26□□□□□ -1.09
CDK9-205ENST00000498339 ZNF705DP0CH99 300 aaPredicted RBP8.26□□□□□ -1.09
CDK9-205ENST00000498339 ZNF705BP0CI00 300 aaPredicted RBP8.26□□□□□ -1.09
CDK9-205ENST00000498339 AP2S1P53680 142 aaPredicted RBP8.26□□□□□ -1.09
CDK9-205ENST00000498339 HSPE1P61604 102 aaKnown RBP8.26□□□□□ -1.09
CDK9-205ENST00000498339 TBCEQ15813 527 aaPredicted RBP8.26□□□□□ -1.09
CDK9-205ENST00000498339 SFXN4Q6P4A7 337 aa8.26□□□□□ -1.09
CDK9-205ENST00000498339 GSG1LQ6UXU4 331 aa8.26□□□□□ -1.09
CDK9-205ENST00000498339 MRGPRFQ96AM1 343 aa8.26□□□□□ -1.09
CDK9-205ENST00000498339 C7orf50Q9BRJ6 194 aaKnown RBP8.26□□□□□ -1.09
CDK9-205ENST00000498339 FXYD6Q9H0Q3 95 aa8.26□□□□□ -1.09
CDK9-205ENST00000498339 LOC102723971A0A1B0GUV8 181 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 RPS10-NUDT3A0A1W2PQS6 291 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 CLN5O75503 358 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 NUDT3O95989 172 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 HBE1P02100 147 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 HNRNPCP07910 306 aaKnown RBP eCLIP8.25□□□□□ -1.09
CDK9-205ENST00000498339 HLA-DRB4P13762 266 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 RFX2P48378 723 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 HOXA1P49639 335 aaPredicted RBP8.25□□□□□ -1.09
CDK9-205ENST00000498339 SUB1P53999 127 aaKnown RBP eCLIP8.25□□□□□ -1.09
CDK9-205ENST00000498339 TIGITQ495A1 244 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 OR5H2Q8NGV7 314 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 GLMPQ8WWB7 406 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 PDCD10Q9BUL8 212 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 ENY2Q9NPA8 101 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 DIABLOQ9NR28 239 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 GOLT1BQ9Y3E0 138 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 YTHDF2Q9Y5A9 579 aaKnown RBP8.25□□□□□ -1.09
CDK9-205ENST00000498339 HLA-DRB4X5D2U9 266 aa8.25□□□□□ -1.09
CDK9-205ENST00000498339 INAFM2P0DMQ5 153 aa8.24□□□□□ -1.09
CDK9-205ENST00000498339 MXD1Q05195 221 aa8.24□□□□□ -1.09
CDK9-205ENST00000498339 OXA1LQ15070 435 aa8.24□□□□□ -1.09
CDK9-205ENST00000498339 C16orf54Q6UWD8 224 aa8.24□□□□□ -1.09
CDK9-205ENST00000498339 TBC1D26Q86UD7 250 aa8.24□□□□□ -1.09
CDK9-205ENST00000498339 OR5H6Q8NGV6 325 aa8.24□□□□□ -1.09
CDK9-205ENST00000498339 OR6F1Q8NGZ6 308 aa8.24□□□□□ -1.09
CDK9-205ENST00000498339 SLC25A38Q96DW6 304 aa8.24□□□□□ -1.09
CDK9-205ENST00000498339 SEC22AQ96IW7 307 aa8.24□□□□□ -1.09
CDK9-205ENST00000498339 AUNIPQ9H7T9 357 aa8.24□□□□□ -1.09
CDK9-205ENST00000498339 NRN1Q9NPD7 142 aa8.24□□□□□ -1.09
CDK9-205ENST00000498339 TXNL4BQ9NX01 149 aaKnown RBP8.24□□□□□ -1.09
CDK9-205ENST00000498339 MRPL36Q9P0J6 103 aaKnown RBP8.24□□□□□ -1.09
CDK9-205ENST00000498339 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
CDK9-205ENST00000498339 CCL18P55774 89 aa8.23□□□□□ -1.09
CDK9-205ENST00000498339 TAS2R46P59540 309 aa8.23□□□□□ -1.09
CDK9-205ENST00000498339 DEFB1P60022 68 aa8.23□□□□□ -1.09
CDK9-205ENST00000498339 IZUMO4Q1ZYL8 232 aa8.23□□□□□ -1.09
CDK9-205ENST00000498339 IDNKQ5T6J7 187 aa8.23□□□□□ -1.09
CDK9-205ENST00000498339 GDF5OSQ5U4N7 250 aa8.23□□□□□ -1.09
CDK9-205ENST00000498339 SIGLEC15Q6ZMC9 328 aa8.23□□□□□ -1.09
CDK9-205ENST00000498339 OR4B1Q8NGF8 309 aa8.23□□□□□ -1.09
CDK9-205ENST00000498339 OR4X1Q8NH49 305 aa8.23□□□□□ -1.09
CDK9-205ENST00000498339 ZNRF2Q8NHG8 242 aa8.23□□□□□ -1.09
CDK9-205ENST00000498339 LINC00052Q96N35 136 aa8.23□□□□□ -1.09
CDK9-205ENST00000498339 TRAV30A0A087WSZ9 112 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 A0A0A6YYH2 397 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 A6NJ64 397 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 IGKV1-39P01597 117 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 IGKV1D-39P04432 117 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms