RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 SNAPC5O75971 98 aa7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 KRASP01116 189 aa7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 HBE1P02100 147 aa7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 G6PCP35575 357 aa7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 RASSF2P50749 326 aa7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 OR10A3P58181 314 aa7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 DEFB1P60022 68 aa7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 SNRPD3P62318 126 aaKnown RBP7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 CDPF1Q6NVV7 123 aa7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 Q6ZRN7 208 aaPredicted RBP7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 CYGBQ8WWM9 190 aa7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 UFD1Q92890 307 aa7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 ATG5Q9H1Y0 275 aa7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 SEPSECSQ9HD40 501 aaKnown RBP7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 FKBP11Q9NYL4 201 aa7.83□□□□□ -1.16
HLA-DOA-206ENST00000495532 A0A1W2PPQ1 181 aa7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 IFITM5A6NNB3 132 aa7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 FAM229AH3BQW9 127 aa7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 IGKV3-20P01619 116 aa7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 EIF2B2P49770 351 aaKnown RBP7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 FXYD4P59646 89 aa7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 ICAM4Q14773 271 aa7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 USF2Q15853 346 aaPredicted RBP7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 C16orf54Q6UWD8 224 aa7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 BPIFB6Q8NFQ5 453 aa7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 RNF141Q8WVD5 230 aa7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 FCAMRQ8WWV6 532 aa7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 MRPL36Q9P0J6 103 aaKnown RBP7.82□□□□□ -1.16
HLA-DOA-206ENST00000495532 RLN1P04808 185 aa7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 F2RP25116 425 aa7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 LPAR6P43657 344 aa7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 NKX2-1P43699 371 aaPredicted RBP7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 HOXA1P49639 335 aaPredicted RBP7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 AP2S1P53680 142 aaPredicted RBP7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 PRCDQ00LT1 54 aa7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 FABP5Q01469 135 aa7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 RRN3P1Q2M238 152 aa7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 TPRA1Q86W33 373 aa7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 PQLC1Q8N2U9 271 aa7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 SYT8Q8NBV8 401 aa7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 NARS2Q96I59 477 aaKnown RBP7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 SLC35B3Q9H1N7 401 aa7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 GOLT1BQ9Y3E0 138 aa7.81□□□□□ -1.16
HLA-DOA-206ENST00000495532 F5H768 121 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 GNAO1P09471 354 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 PSMA1P25786 263 aaKnown RBP7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 LINC00315P59091 139 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 GNG2P59768 71 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 ARPC4P59998 168 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 HAMPP81172 84 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 CLINT1Q14677 625 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 TRAM1Q15629 374 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 TMEM17Q86X19 198 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 BEST4Q8NFU0 473 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 CLUHP3Q96NS8 147 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 UPK3BQ9BT76 320 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 SAV1Q9H4B6 383 aaPredicted RBP7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 NRN1Q9NPD7 142 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 ZNF586Q9NXT0 402 aa7.8□□□□□ -1.16
HLA-DOA-206ENST00000495532 LYRM9A8MSI8 78 aa7.79□□□□□ -1.16
HLA-DOA-206ENST00000495532 CLN5O75503 358 aa7.79□□□□□ -1.16
HLA-DOA-206ENST00000495532 IGKV1-17P01599 117 aa7.79□□□□□ -1.16
HLA-DOA-206ENST00000495532 DEFB130BP0DP73 79 aa7.79□□□□□ -1.16
HLA-DOA-206ENST00000495532 DEFB130AP0DP74 79 aa7.79□□□□□ -1.16
HLA-DOA-206ENST00000495532 LGALS14Q8TCE9 139 aa7.79□□□□□ -1.16
HLA-DOA-206ENST00000495532 TMEM230Q96A57 120 aa7.79□□□□□ -1.16
HLA-DOA-206ENST00000495532 TSC22D3Q99576 134 aa7.79□□□□□ -1.16
HLA-DOA-206ENST00000495532 C7orf50Q9BRJ6 194 aaKnown RBP7.79□□□□□ -1.16
HLA-DOA-206ENST00000495532 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
HLA-DOA-206ENST00000495532 PGLYRP1O75594 196 aaPredicted RBP7.78□□□□□ -1.16
HLA-DOA-206ENST00000495532 ATP5HO75947 161 aa7.78□□□□□ -1.16
HLA-DOA-206ENST00000495532 HNRNPCP07910 306 aaKnown RBP eCLIP7.78□□□□□ -1.16
HLA-DOA-206ENST00000495532 ZNF79Q15937 498 aa7.78□□□□□ -1.16
HLA-DOA-206ENST00000495532 FOXI2Q6ZQN5 318 aa7.78□□□□□ -1.16
HLA-DOA-206ENST00000495532 C8orf59Q8N0T1 100 aaPredicted RBP7.78□□□□□ -1.16
HLA-DOA-206ENST00000495532 UHRF2Q96PU4 802 aa7.78□□□□□ -1.16
HLA-DOA-206ENST00000495532 FNDC4Q9H6D8 234 aaPredicted RBP7.78□□□□□ -1.16
HLA-DOA-206ENST00000495532 S100A14Q9HCY8 104 aa7.78□□□□□ -1.16
HLA-DOA-206ENST00000495532 PLA2G2DQ9UNK4 145 aa7.78□□□□□ -1.16
HLA-DOA-206ENST00000495532 TRAV1-2A0A0B4J238 106 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 PDCD5O14737 125 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 PRM2P04554 102 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 ATP5G1P05496 136 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 HSMCR30P0CW71 290 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 ATP5G3P48201 142 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 ERVFC1-1P60608 527 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 HSPE1P61604 102 aaKnown RBP7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 ERHP84090 104 aaKnown RBP7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 TIGITQ495A1 244 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 SPINK9Q5DT21 86 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 TMEM69Q5SWH9 247 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 SIGLEC15Q6ZMC9 328 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 HOGA1Q86XE5 327 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 DHRSXQ8N5I4 330 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 TSPAN14Q8NG11 270 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 OR4B1Q8NGF8 309 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 OR4X1Q8NH49 305 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 CCDC90BQ9GZT6 254 aa7.77□□□□□ -1.17
HLA-DOA-206ENST00000495532 PLAC8L1A1L4L8 177 aa7.76□□□□□ -1.17
HLA-DOA-206ENST00000495532 EREGO14944 169 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms